Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3139 ATGGCGGTAACTTCAACATCACTCGTTTCCCAACTCTCCATTGGCCTTCGTCGCCACCCTTCCCCCAAGCTCGATTCTTTCACTTCCACCAACCCCTTCTTCGATGCCATTCATCCCAATCTTCGTTTATCCATCTCCTCCCCCAAACCCTCTCGCACCGTCATCGCCATGGCTGGCTCTGGCAAGTTCTTTGTTGGTGGCAACTGGAAGTGTAATGGAACAAAAGACTCCATCAGTAAGCTTATCTCTGACTTGAACAATGCAAAGTTGGAGCCTGACGTTGATGTCGTTGTTGCACCCCCCTTTGTGTACATCGATCAGGTGAAAACCTCAATTACAGACAGGATTGAAATATCCGGTCAGAATTCTTGGGTGGGAAAAGGTGGTGCTTTCACCGGAGAAATCAGTGTGGAACAACTGAAAGATCTTGGATGCAAGTGGGTTATTCTTGGGCATTCTGAGCGAAGGCATGTTATTGGAGAAAAAGATGAGTTTATAGGAAAGAAAGCTGCATATGCTTTGAGCGAGGGTCTTGGAGTGATTGCATGCATTGGTGAATTGTTGGAAGAAAGGGAAGCTGGGAAAACTTTTGATGTCTGTTTCCAGCAATTGAAGGCTTATGCAGATGCGGTGCCTAGTTGGGATAATATTGTTATTGCATATGAACCTGTATGGGCCATCGGGACCGGCAAAGTGGCCTCTCCCGAGCAAGCTCAGGAAGTACACGTAGCTCTTCGAGACTGGCTTAAAAATAATGTCTCGGCTGAAGTTGCTTCTAAAACACGTATCATTTATGGAGGATCTGTTAATGGAGGCAACAGTGCTGATCTTGCAAAGAAAGAAGATATTGATGGATTTCTTGTTGGAGGTGCTTCATTAAAGGGTCCTGAGTTTGCCACCATTGTCAATTCAGTCACATCCAAGAAAGTCACGGCTTGA 939 0.459 MAVTSTSLVSQLSIGLRRHPSPKLDSFTSTNPFFDAIHPNLRLSISSPKPSRTVIAMAGSGKFFVGGNWKCNGTKDSISKLISDLNNAKLEPDVDVVVAPPFVYIDQVKTSITDRIEISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIACIGELLEEREAGKTFDVCFQQLKAYADAVPSWDNIVIAYEPVWAIGTGKVASPEQAQEVHVALRDWLKNNVSAEVASKTRIIYGGSVNGGNSADLAKKEDIDGFLVGGASLKGPEFATIVNSVTSKKVTA* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3139 312 Pfam Triosephosphate isomerase 64 304 IPR000652 GO:0004807
Mtr7g3139 312 Gene3D Aldolase class I 45 311 IPR013785 -
Mtr7g3139 312 CDD TIM 63 303 IPR000652 GO:0004807
Mtr7g3139 312 PANTHER TRIOSEPHOSPHATE ISOMERASE 1 310 IPR000652 GO:0004807
Mtr7g3139 312 TIGRFAM tim: triose-phosphate isomerase 64 294 IPR000652 GO:0004807
Mtr7g3139 312 PANTHER TRIOSEPHOSPHATE ISOMERASE, CHLOROPLASTIC 1 310 - -
Mtr7g3139 312 ProSitePatterns Triosephosphate isomerase active site. 220 230 IPR020861 GO:0004807
Mtr7g3139 312 SUPERFAMILY Triosephosphate isomerase (TIM) 60 305 IPR035990 GO:0004807
Mtr7g3139 312 Hamap Triosephosphate isomerase [tpiA]. 61 304 IPR022896 GO:0004807|GO:0006096
Mtr7g3139 312 ProSiteProfiles Triosephosphate isomerase (TIM) family profile. 62 304 IPR000652 GO:0004807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3139 Mtr-Chr7 48355832 48359867 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3139 K01803 - gmx:100799358 529.25