Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3111 ATGGAGGTTACAAAGAAGTTGAAGCTAAAGCATTTGATATCAAAGGTACTAAAGGGTCTTCATTTCTTGGAAATCAGTAAAGCATATACAAAAAGAGCTGATTATTTGAGAATCAGAGACATTGATGATGAAGAGAGTGAAACAGAAACAACTGTTCCTGAAGGGTTTTTTGCGGTTATTGCAATGCAAGGTGAAGAAACAAAGAGATTTGTTCTTGAGTTGGATTACTTAAGAAATCCTCATTTCATGAAACTATTGGAGCAAGCTAAGGATGAGTATGGTTATCAACAAAAGGGTGCTATTGCATTGCCATGTAAGCCTCAAGAACTTCAAAAGATTATAGAGAATCGACATAGTGATGCTTTATAA 369 0.3496 MEVTKKLKLKHLISKVLKGLHFLEISKAYTKRADYLRIRDIDDEESETETTVPEGFFAVIAMQGEETKRFVLELDYLRNPHFMKLLEQAKDEYGYQQKGAIALPCKPQELQKIIENRHSDAL* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3111 122 Pfam Auxin responsive protein 37 114 IPR003676 GO:0009733
Mtr7g3111 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 119 IPR003676 GO:0009733
Mtr7g3111 122 PANTHER F8A24.8 PROTEIN 8 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3111 Mtr-Chr7 48049838 48050651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3111 21 120 Calmodulin-binding Proteins AT3G43120 35.514 7.99e-13 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3111 - K14488 gmx:102661602 126.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3111 7 48049838 48050651 Mtr1g2169 1 31860951 31861259 PCT