Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3098 ATGACATCTAGGAAGAGGAATCGTGTTGCTGATGATGGAGGGATTTCCTTTTCAAGGTGTGTCAAGAAATTGGCCGAAGAATACAAAGGAAAAACACGAGTGGATCCTCATGGGAAAAATGGAAAAGGAGACGGAGATATTGTATGTGACAAGTGTTTGCTTGAAGGAACACTCTTGTTCTGTTGTGGTAAAGGATGTCAAAGGAGGTATCACCCGTCTTGTTTGGATCCTCTTCTCAAATTTCTTCCTATAGGGTTTTGGCATTGCCTTTGGTGTGTTGAGAAAAAAATAAAGCTTGGTGTGCATTCTGTTTCTAAAGGGGTAGAATCCATATTGGATTCCCGAGAAGTCGTTTCAAAAGATAAAGTGATCCAAAGGGAGTACTTTGTCAAGTATCAGGACCTCGCTCATGCTCACAACTGTTGGATTCCAGAAAAGCAAATGCTTATTGAGGCTCCAAAGCTTTTGAAAAAGTATAAGAATAGAAAACAGGTTGTCCGGTGGAAAAAAGATTGGAGTATACCTCACCGGTTGCTACTAAAAAGGGAAATTATACTGTCAAAGAAAAACGCGCACCTTTTTGATGGGAATGATGACAACGATTCAGTTTGCCAATATGAATGGCTTGTGAAATGGACTGGTCTTGGTTATGATCATGTTACATGGGAGTTAGACGACGCTTCCTTTATGACTTCATCTAAAGGCAAGGAACTCGTGGACAATTATGAAAGTCGTCAAAAGAAATCAGATGGACCGTCAACTCCTTTTGAAGCTAATGAGGAGAGTAAAGTTTCCTTTACCGAATTATCAGAGCTATCATCTGGAGATTCACCAGGATTGTATAACCAGCATTTGAGTTATGTGAACAGGCTGCGCATGCATTGGCACAAAGGTCAGAGTGCTGTTATTGTTGATGATCAAATTGACCAGGAGCGGGTTAGGAAGATGATTTTGTTTATATTATCATTGAGTTGCGATGTGAAAAAGCCTTTTCTCATCATCTCAACTTCTACTGGCCTCTCTGCATGGGAAATTGAATTCTTTCATTTGGCACCATCTGCCAATCTTGTAGTTTACAAGGGAAAGGAAGATGTACGCCGTAGAATCAGGGCATTAGATTTTTATAATGAAGATGGTGGTATTTTATTTCAAATATTACTATCATCATCTGATAGTATCAGTGAGGACTTACATGCTCTAAGATGCATTCCATGGGAAGCAATAGTAATTGATGAATGCCAGCGACCCATGATTTTAAGACACATTGACAATTTCAATATTCTAGCAGCTGACATAAGAAGGCTTCTTCTCGTTAGTGGACAAATCAAGGAAGATCGAGATTATATCAAACTGCTTTCATTCCTTAAGTCTGGACATGATGAGTTACATTTCTCATCTGCAAGCATCTCCAATTTGCAGAGTGAATTGGAACAATATACTGTATTGAAATGCAATTCTGTCTCCAGCAGGTTTATCGAGTATTGGGTTCCTGCTCAGTTTTCCAGTATGCAGCTTAAGCAGTATTGTTCAATGCTGCTTTCAAACTCAATGTTGTTATGCTCTGGCCAAAGGTCTGACTCTGTTGGTGCCCTCCGTGAGCTTGTCATCTCAACAAAGAAGTGCTGCAACCATCCTTATCTCCTCAACCCGTCACTGAATAATTTAGTCACTAGAGGTCTGCCTGTCGAAGAGCATTTTAATATTGGAATAAAAGCAAGTGGAAAATTGCAACTTCTTGAAAAGATCCTTTTTGAAGCTAAAAGTCGTAAGCTAAGAGTGATCATATTATTTCAGTCTAGTTGTGGTTCTAGATCAATTGGAGATATTTTGGACGATGTTCTCTGTCATAGATTTGGAGAAGATTGCTATGTACGATATTGCAAGGATTACATTCCTTCAAAGAATCAAGCTGCTTTGGACACATTTAATGACAGAGAAAGTGGAAAATTTGTTTTCTTGATAGAGAACCGTGCTTGTACCTCTAGCATTAAGCTCTCATCTGTCGATACCATTATATTATTTGACAGTGATTTGGACCCGCAAAATGACCTAAAATGCGTACAAAAAATGTCAATCAGCTCAAACTTCAAACAGCTAACAGTCTTGAGATTGTACTCATACTTAACTGTTGAAGAAAAGGTTTTAGCGCTTGCAAAAGAGGGTATAGCTCTCGACAGAAATATGCAGCTAAACCAGAGCAGTATTCACACCCTGCTTAAATGGGGTGCCTCTTATCTGTTCAGCAAGTTTGATGATTTACATGGAAGTGGCACCTCAGTCTCTGCTTCAGGCATCTCTGATCAGTCAATTCTAAATGATGTAATCTGCGAATTATCATGCAAATTGGCTTCTGATAGCGATGCCACTCATTCTCACAGACAGTCTTTCATATCGAGAGTAAAACAGAATGGCGGGGAATATGCAAGGAATATTTCACTTCTAGGAGAGAGGGAAATGATGAAATTGGGCAATGATACACATACTTTTTCCTGGAGTGATCTCCTCAAAGGAAGGAAACCTCACTGGAATTTTTTGCCTGTTTCGTCTCAAAGGATCAGAAAAACAGTTGAACATTTTCCTCACACAGCGAAAGGACCTAAACAAGAAAATGATGCCATTATAAGGAAGAAAAGGACAGAGTCCAAGGATAATGTTTTTCCCATAAGAAAGAACGTGTCCAAGGATAATGTAGATCCTGAGAAGAGGGAAATCACCAAGGATAATATTGACCCAAAAAGAAGGAAACTGTCCAAGGAAATTGTTGATTCCAAGCATCTGAGAAAAAAGTGGATGAACAAGAAGAGTCGAAGTGCTGGTAAAAGGAAAGGCAAATTCAATGGAGCAGCTGTAATGAAGAAACAAATTCCGAAACAAAAGAAACTGCATGGCATGCCCAAGAGTACCAAACTCTTGTCAAAGCCTGATATATCTGGTCTCTGTGATGTTCTACACTTTTCGAAAAATGTCAAGGCTGTCGCCATTAGGATTCTTGAGTATGTATTCGAAAATTACAACATTAACTGCCGGGAAGTTTCTACAGTGCAGGCATTTGAAATATCTGTGTGTTGGATAGCAGCTTCTTTGTTGAAACACAAGATTGATAGGAAACATTCACTTGATCTTGCAAAACGGCATTTGAATTTGGATTGCAAGGAGGAAGAAGCCACCGATGTTTATCATGTACTGAAGAAGTGTGAGAAAGATTTTTCAAGCTGTTTACAAAATGAACTTTGTGTTGAGAAAAGTAATATAAATGGTGGTTCAGGCTCCTTGACACCTGAGCTGCAAGATTCGGTAGAGGAGGAGAATCAAAAGGGTTTTCAGCGTCCTCATGTTTTAAATCTTGTAAAATCTGCCGCAACCGAACCTGATCTTCCAAGAAAATCTCCCACAACAGTGCTATTTTCACAAGACCAGATCTATACAGAAAACATTCACAACAAACCTTATGTGACTCATGAAATTTCTACATCTAAAATCACCCTTGGTAATATGTCTGTGGAAATGGAAGTAGATGCTTCCATGGAATCTGAAGCAGATGAGAGAATAAATGCCGTGAACTCGGTAGCAGCTGAAGTTTCATCCCTCGAGCAATGGGATAAAGTTCCCAATTCAAGTAATGATATCAATTATGTCAGCCCTGTTACATGTTCTTTGGAAAGACAGAGTCACGTTGTAAATGCAGATATTACACAATTTGATGGCAGAGTTTTTATAGATCCTCAAACTTTAATGAATCAATTGATTGACATTGACAATTCTTTGAATATGTCAACTCATCCTGCACAACTTCACAATGTTGAGACAGATACTGTAACTTGTGATAGAACTGCTGTTGCTGCTGTCAGACAGCGGCACAGGATAGTGAATCCTGTATGTGGTGTGTCAACTGCTTCAGGGTTTGCTGAGTGTCCTTTACCATATATGCAACCATCACATGCTAATTTGACACCATTCCCACAGACGTTGTCAGCTAGTCCATCATTTATGGAGGACTTATCTCGGTCAGTAATGCCTCTGGATAGATTTATAAATCATAATGGTCGAGATCATCGTTACATACGTGGGTCTGAAGAAAGGTTGCAAGCACTGTATGATCCCGTGGAACTGGCTAGCTCTTCCTTTGTTTCGCCTGTGACATCGCAACCCTCCAGTTATGCGCCCTGGAATGGAAATGCTATTCATGTTCCTCATGACATCACTAATCCAGGATATATGAGCAGTGATCCTTTTCAAGCTCATTATGTGACATATCAAATGCCCCATGTTGCAGACCCAGATCCACTACTAATTGAAATGGAGAGAATAAGAAAGATGAATGAAAGCGCCGTCAAGACACATGAGGAAAAAATATTGCAGCTGCAGTCGGACTACAAAAAGGAGTTTGAGACGTTATGTGAAAAGCACTGTATGATGCTTCAGAACGTCAATACTGCAGTAGCATTAAAGAATAAGGATCTTGAGACACAGCGTGATATCGTTCTCATGAATATGATATTAGCTGATGTTTGGGTCCGAAATGATAGTAGTTGGTAA 4536 0.3955 MTSRKRNRVADDGGISFSRCVKKLAEEYKGKTRVDPHGKNGKGDGDIVCDKCLLEGTLLFCCGKGCQRRYHPSCLDPLLKFLPIGFWHCLWCVEKKIKLGVHSVSKGVESILDSREVVSKDKVIQREYFVKYQDLAHAHNCWIPEKQMLIEAPKLLKKYKNRKQVVRWKKDWSIPHRLLLKREIILSKKNAHLFDGNDDNDSVCQYEWLVKWTGLGYDHVTWELDDASFMTSSKGKELVDNYESRQKKSDGPSTPFEANEESKVSFTELSELSSGDSPGLYNQHLSYVNRLRMHWHKGQSAVIVDDQIDQERVRKMILFILSLSCDVKKPFLIISTSTGLSAWEIEFFHLAPSANLVVYKGKEDVRRRIRALDFYNEDGGILFQILLSSSDSISEDLHALRCIPWEAIVIDECQRPMILRHIDNFNILAADIRRLLLVSGQIKEDRDYIKLLSFLKSGHDELHFSSASISNLQSELEQYTVLKCNSVSSRFIEYWVPAQFSSMQLKQYCSMLLSNSMLLCSGQRSDSVGALRELVISTKKCCNHPYLLNPSLNNLVTRGLPVEEHFNIGIKASGKLQLLEKILFEAKSRKLRVIILFQSSCGSRSIGDILDDVLCHRFGEDCYVRYCKDYIPSKNQAALDTFNDRESGKFVFLIENRACTSSIKLSSVDTIILFDSDLDPQNDLKCVQKMSISSNFKQLTVLRLYSYLTVEEKVLALAKEGIALDRNMQLNQSSIHTLLKWGASYLFSKFDDLHGSGTSVSASGISDQSILNDVICELSCKLASDSDATHSHRQSFISRVKQNGGEYARNISLLGEREMMKLGNDTHTFSWSDLLKGRKPHWNFLPVSSQRIRKTVEHFPHTAKGPKQENDAIIRKKRTESKDNVFPIRKNVSKDNVDPEKREITKDNIDPKRRKLSKEIVDSKHLRKKWMNKKSRSAGKRKGKFNGAAVMKKQIPKQKKLHGMPKSTKLLSKPDISGLCDVLHFSKNVKAVAIRILEYVFENYNINCREVSTVQAFEISVCWIAASLLKHKIDRKHSLDLAKRHLNLDCKEEEATDVYHVLKKCEKDFSSCLQNELCVEKSNINGGSGSLTPELQDSVEEENQKGFQRPHVLNLVKSAATEPDLPRKSPTTVLFSQDQIYTENIHNKPYVTHEISTSKITLGNMSVEMEVDASMESEADERINAVNSVAAEVSSLEQWDKVPNSSNDINYVSPVTCSLERQSHVVNADITQFDGRVFIDPQTLMNQLIDIDNSLNMSTHPAQLHNVETDTVTCDRTAVAAVRQRHRIVNPVCGVSTASGFAECPLPYMQPSHANLTPFPQTLSASPSFMEDLSRSVMPLDRFINHNGRDHRYIRGSEERLQALYDPVELASSSFVSPVTSQPSSYAPWNGNAIHVPHDITNPGYMSSDPFQAHYVTYQMPHVADPDPLLIEMERIRKMNESAVKTHEEKILQLQSDYKKEFETLCEKHCMMLQNVNTAVALKNKDLETQRDIVLMNMILADVWVRNDSSW* 1512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3098 1511 ProSiteProfiles Chromo and chromo shadow domain profile. 106 171 IPR000953 -
Mtr7g3098 1511 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 48 1084 - -
Mtr7g3098 1511 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 1095 1510 - -
Mtr7g3098 1511 Gene3D - 1426 1506 - -
Mtr7g3098 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 317 457 IPR027417 -
Mtr7g3098 1511 Gene3D - 107 165 - -
Mtr7g3098 1511 SMART chromo_7 105 164 IPR000953 -
Mtr7g3098 1511 SMART chromo_7 171 247 IPR000953 -
Mtr7g3098 1511 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 48 1084 - -
Mtr7g3098 1511 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 1095 1510 - -
Mtr7g3098 1511 ProSitePatterns Zinc finger PHD-type signature. 49 92 IPR019786 -
Mtr7g3098 1511 SUPERFAMILY Chromo domain-like 205 246 IPR016197 -
Mtr7g3098 1511 Gene3D - 490 725 IPR027417 -
Mtr7g3098 1511 Pfam Chromo (CHRromatin Organisation MOdifier) domain 108 162 IPR023780 -
Mtr7g3098 1511 Gene3D - 166 245 - -
Mtr7g3098 1511 Gene3D - 280 489 IPR038718 -
Mtr7g3098 1511 SMART PHD_3 48 93 IPR001965 -
Mtr7g3098 1511 ProSiteProfiles Chromo and chromo shadow domain profile. 180 254 IPR000953 -
Mtr7g3098 1511 MobiDBLite consensus disorder prediction 241 260 - -
Mtr7g3098 1511 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 578 743 IPR001650 -
Mtr7g3098 1511 SUPERFAMILY Chromo domain-like 65 164 IPR016197 -
Mtr7g3098 1511 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 103 IPR013083 -
Mtr7g3098 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 492 728 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3098 Mtr-Chr7 47921352 47937625 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3098 - K11643 gmx:100813574 1568.9