Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3082 ATGATAAATACAACAACAAACGGTAACATGACGGCGGCGTCATCTTCATCTTCATCGGGTCCTACAACAACTACACAGTCGCAACAACAAGGTCTCAAAACCTATTTCAAAACCCCTGAAGGAAGATATAAACTTCAATTCGATAAAACTCATCCTTCTGGTCTTCTTCAATTCAATCATGGCAAAACCGTTTCTATGGTAACCCTAGCACATCTGAAGGAGAAGCCGGCGCCTTTGACTCCAACTGCATCGTCTTCGAGTTTTAGTGCGAGCAGTGGAGTACGGTCAGCCGCGGCTAGATTGTTAGGAGGAAGTAATGGAAACCGGGCGCTTAGTTTTGTTGGTGGAAACGGTAGTAGCAAAAGCAATGGTGGAGCCAGTAGGATTGGTTCAATTGGTTCCTCGAGCTTGAGTAGTTCGGTGGCTAATCCAAATTTTGATGGGAAAGGGTCTTACTTGGTGTTCAATGCTGGGGATGCGATTTTGATAAGTGATTTGAATTCTCAAGATAAGGACCCCATAAAGTCTATCCACTTCAGTAATTCGAATCCCGTGTGCCACGCATTTGATCAGGATGCTAAGGACGGGCATGATTTACTCATAGGGTTGTTCTCTGGCGATGTTTACTCGGTGTCACTGAGACAGCAATTACAGGATGTTGGTAAAAAGATTGTTGGGGCCCACCATTACAACAAAGATGGAATTCTCAATAACAGTCGTTGTACATGTATTTCTTGGGTGCCTGGAGGTGATGGTGCTTTTGTTGTTGCTCATGCTGATGGGAATTTGTACGTATATGAAAAGAATAAAGATGGTGCCGGCGAGTCTTCATTCCCAATCCTTAAAGATCAAACTCTGTTTTCTGTTGCTCATGCACGGTACAGTAAGAGTAATCCAATAGCCAGATGGCATATATGCCAGGGTTCGATTAACAGTATTTCTTTCTCAGCAGATGGTGCATACTTGGCAACTGTTGGACGAGATGGTTACTTGCGAGTGTTCGATTATACAAAAGAACACCTTGTATGCGGTGGGAAAAGTTATTATGGTGGTTTATTATGTTGTGCTTGGAGCATGGACGGAAAGTATATTTTGACGGGAGGAGAAGACGATTTAGTTCAAGTTTGGAGCATGGAAGATCGCAAAGTTGTTGCATGGGGTGAGGGACATAACTCATGGGTCAGTGGAGTGGCTTTTGATTCATATTGGTCATCACCAAATTCAAATGACAATGGAGAGACAATTACATATCGATTTGGTTCAGTTGGTCAGGATACACAATTGCTTCTATGGGAACTGGAAATGGACGAGATTGTAGTGCCCTTGAGGCGAGGTCCCCCTGGTGGATCCCCAACATTTGGATCCCCAACTTTTAGTGCTGGAAGCCAGTCTTCGCATTGGGACAATGCAGTCCCGTTGGGTACCTTACAGCCTGCTCCAAGTATGCGGGATGTTCCGAAAATCTCTCCGCTGGTAGCTCACCGTGTGCATACCGAGCCACTTTCTAGCTTAATATTTACCCAAGAATCTGTACTCACAGCCTGCCGGGAGGGGCACATTAAAATCTGGACGAGACCTGGTGTAGCTGAGAGCCAGCCAAGCAACTCCGAAACCTTGTTAGCAACTAGTCTCAAGGAGAAGCCTTCACTTTCTAGCAAGATCAGCAATTCTATCTACAAACAATAA 1686 0.4472 MINTTTNGNMTAASSSSSSGPTTTTQSQQQGLKTYFKTPEGRYKLQFDKTHPSGLLQFNHGKTVSMVTLAHLKEKPAPLTPTASSSSFSASSGVRSAAARLLGGSNGNRALSFVGGNGSSKSNGGASRIGSIGSSSLSSSVANPNFDGKGSYLVFNAGDAILISDLNSQDKDPIKSIHFSNSNPVCHAFDQDAKDGHDLLIGLFSGDVYSVSLRQQLQDVGKKIVGAHHYNKDGILNNSRCTCISWVPGGDGAFVVAHADGNLYVYEKNKDGAGESSFPILKDQTLFSVAHARYSKSNPIARWHICQGSINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDTQLLLWELEMDEIVVPLRRGPPGGSPTFGSPTFSAGSQSSHWDNAVPLGTLQPAPSMRDVPKISPLVAHRVHTEPLSSLIFTQESVLTACREGHIKIWTRPGVAESQPSNSETLLATSLKEKPSLSSKISNSIYKQ* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3082 561 MobiDBLite consensus disorder prediction 528 561 - -
Mtr7g3082 561 PANTHER WD REPEAT-CONTAINING PROTEIN 20-LIKE 5 546 - -
Mtr7g3082 561 Pfam WD domain, G-beta repeat 352 377 IPR001680 GO:0005515
Mtr7g3082 561 Pfam WD domain, G-beta repeat 307 335 IPR001680 GO:0005515
Mtr7g3082 561 ProSiteProfiles Trp-Asp (WD) repeats profile. 345 386 IPR001680 GO:0005515
Mtr7g3082 561 MobiDBLite consensus disorder prediction 1 31 - -
Mtr7g3082 561 Gene3D - 22 532 IPR015943 GO:0005515
Mtr7g3082 561 SUPERFAMILY WD40 repeat-like 141 525 IPR036322 GO:0005515
Mtr7g3082 561 PANTHER WD REPEAT PROTEIN 5 546 - -
Mtr7g3082 561 SMART WD40_4 487 524 IPR001680 GO:0005515
Mtr7g3082 561 SMART WD40_4 296 335 IPR001680 GO:0005515
Mtr7g3082 561 SMART WD40_4 380 432 IPR001680 GO:0005515
Mtr7g3082 561 SMART WD40_4 338 377 IPR001680 GO:0005515
Mtr7g3082 561 SMART WD40_4 229 267 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3082 312 439 Miscellaneous Gene Families AT5G08390 21.875 4.35e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3082 K24741 - gmx:100782580 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3082 7 47636295 47642904 Mtr7g3082 7 47636295 47642904 ECH