Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3046 ATGGATCACCCCGGCGGCCACGCTCCTCTTTCTGAACCCAACACCCCAACCACCCCAAGACCCACCCTATTCCTCTCCACTTCGGGCAAAGCCCTTCTTGTCTCAAACTCCAACAAATCCCTCGTCATTTCCAATTCCGGCAAACGCCTCGTCGAGACACCCTGCAAGAAAAAATATGTTAAACAGGTCACCGGTCGTCATAATGACACCGAGCTTCATCTTGCCGCGCAACGCGGTGATGCTGCTGCTGTTAGGAATATTCTGGCTGAGATTGATGATCAAATGATGGGAACGCTTAGTGGTGCTGAGTTTGATGCTGAAGTTGCGGATATAAGGTCTGCCATTGTTAATGAAGTTAATGACTTGGGTGAAACCGCGCTTTTTACCGCTGCTGAGAAAGGTCGTTTTGATGTTGTTAAAGAGCTTCTTCCTTATACCACCAAAGAAGGACTATCTTCCAAAAACCGCTCTGGTTTTGATCCCTTGCATATTGCAGCAAATCAAGGTCACAAAGAGATTGTGCAGTTGCTGCTAGACCATGATCCAGAGCTAATCAAGACATTTGCACAGTCAAATGCAACTCCTCTTGTATCTGCAGCTACAAGAGGGCATGCGGATATTGTTGAATTGTTACTATCTTATGATCCTAGTCAATTGGAGATAGCTAGATCCAATGGAAAGAATGCACTTCATTTATCTGCACGTCAGGGATATGTTGATATTGTCAAGATATTGTTAGGGAAGGACCCGCAACTTGCTCGAAGGACTGATAAGAAAGGACAAACGCCCCTTCATATGGCGGTCAAAGGGGTTAACTGTGAAGTGGTGAAGTTGCTTCTTGCTGCTGATGGTGCAAGTGTCATGCTTCCAGACAAGTTTGGCAATACTGCATTGCATGTAGCCACCAGGAAGAAGAGGGTAGAGATAGTGAATGAGTTGCTGCTTCTTCCCGACACCAATGCGAATGCCCTTACAAGAGACCACAAAACACCTCTTGACCTTGCGGAAGCACTTCCAATATCAGAAGAGATTTTGGAGATCAAGGACTCACTTATTCGTTATGGTGCAGTTAAAGCCAATGATCTCAACCAGCCAAGGGACGAGCTGAGGAAAACCATGTCTCAGATTAAGAAAGATGTTTCTTTTCAGCTTGAACAAACTCGAAAAACAAACAAGAATGTGAATGGGATTGCCAAGGAGCTACGCAAGTTGCACAGAGCAGGAATCAACAATGCTACCAACTCTGTAACTGTGGTTTCTGTGCTATTTGCAACGGTTGCATTTGCAGCACTTTTCACAGTCCCTGGTGGGGATCATGATAATGGGATGGCTGTGATGGTTCACACTGCATCTTTCAAGACCTTTTTCATCTCTAATGCTATTGCACTTTTCACTTCGTTGGCTGTGGTGGTGGTTCAAATAACTGTTGTTAGAGGGGAGATAAAGTCTGAGAGAAGGGTTACAGAGGTGATCAATAAGATGATGTGGTTAGCCTCTGTGTGCACCTCAGTTTCATTTGTTGCAGCATCTTATATAGTAGTTGGTCGACGCAGCCTGTGGGCTGCAATCCTTGTTACTGTTGTAGGGGCGATTGTAATGGGTGGTGTTCTTGGAACAATGACATACTATGTTATCAAATCCAAACGTCACCGAAGAGTGAGGAAGAAAGAGAAGATCTCAAGGAATGGAACACATTCATGGCGTAATTCTGATTCGGAATCAGAAGTAAATCCAATTTATGCTATTTAA 1749 0.446 MDHPGGHAPLSEPNTPTTPRPTLFLSTSGKALLVSNSNKSLVISNSGKRLVETPCKKKYVKQVTGRHNDTELHLAAQRGDAAAVRNILAEIDDQMMGTLSGAEFDAEVADIRSAIVNEVNDLGETALFTAAEKGRFDVVKELLPYTTKEGLSSKNRSGFDPLHIAANQGHKEIVQLLLDHDPELIKTFAQSNATPLVSAATRGHADIVELLLSYDPSQLEIARSNGKNALHLSARQGYVDIVKILLGKDPQLARRTDKKGQTPLHMAVKGVNCEVVKLLLAADGASVMLPDKFGNTALHVATRKKRVEIVNELLLLPDTNANALTRDHKTPLDLAEALPISEEILEIKDSLIRYGAVKANDLNQPRDELRKTMSQIKKDVSFQLEQTRKTNKNVNGIAKELRKLHRAGINNATNSVTVVSVLFATVAFAALFTVPGGDHDNGMAVMVHTASFKTFFISNAIALFTSLAVVVVQITVVRGEIKSERRVTEVINKMMWLASVCTSVSFVAASYIVVGRRSLWAAILVTVVGAIVMGGVLGTMTYYVIKSKRHRRVRKKEKISRNGTHSWRNSDSESEVNPIYAI* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3046 582 Pfam Ankyrin repeat 294 318 IPR002110 GO:0005515
Mtr7g3046 582 Gene3D - 181 383 IPR036770 -
Mtr7g3046 582 Pfam Ankyrin repeats (3 copies) 72 181 IPR002110 GO:0005515
Mtr7g3046 582 Pfam Ankyrin repeats (3 copies) 222 289 IPR002110 GO:0005515
Mtr7g3046 582 Pfam Domain of unknown function 409 513 IPR026961 -
Mtr7g3046 582 ProSiteProfiles Ankyrin repeat profile. 157 184 IPR002110 GO:0005515
Mtr7g3046 582 ProSiteProfiles Ankyrin repeat profile. 293 326 IPR002110 GO:0005515
Mtr7g3046 582 ProSiteProfiles Ankyrin repeat profile. 259 292 IPR002110 GO:0005515
Mtr7g3046 582 SMART ANK_2a 157 186 IPR002110 GO:0005515
Mtr7g3046 582 SMART ANK_2a 259 289 IPR002110 GO:0005515
Mtr7g3046 582 SMART ANK_2a 225 254 IPR002110 GO:0005515
Mtr7g3046 582 SMART ANK_2a 67 96 IPR002110 GO:0005515
Mtr7g3046 582 SMART ANK_2a 122 156 IPR002110 GO:0005515
Mtr7g3046 582 SMART ANK_2a 293 323 IPR002110 GO:0005515
Mtr7g3046 582 SMART ANK_2a 191 220 IPR002110 GO:0005515
Mtr7g3046 582 ProSiteProfiles Ankyrin repeat region circular profile. 157 184 - -
Mtr7g3046 582 ProSiteProfiles Ankyrin repeat region circular profile. 259 280 - -
Mtr7g3046 582 MobiDBLite consensus disorder prediction 1 21 - -
Mtr7g3046 582 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1 33 575 - -
Mtr7g3046 582 ProSiteProfiles Ankyrin repeat profile. 225 257 IPR002110 GO:0005515
Mtr7g3046 582 PANTHER CASKIN 33 575 - -
Mtr7g3046 582 SUPERFAMILY Ankyrin repeat 72 352 IPR036770 -
Mtr7g3046 582 MobiDBLite consensus disorder prediction 554 582 - -
Mtr7g3046 582 Gene3D - 42 180 IPR036770 -
Mtr7g3046 582 ProSiteProfiles Ankyrin repeat region circular profile. 225 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3046 Mtr-Chr7 47278582 47281068 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3046 4 582 Miscellaneous Gene Families AT3G09550 72.483 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3046 - - gmx:100801840 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3046 7 47278582 47281068 Mtr7g3046 7 47278582 47281068 ECH