Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3021 ATGGCCATAACCGCCACCATTTCAGTCTCTATTACAACACCCACTCGCCGCTCTCTTTCCTCCATCAATTCCATTCTCCCTTCTTCCCGATCCATTTCTGCCACACCACAACCCACTTTCAAATACCCCAATTCCCGCCTCGTTGCACTTGCTTCCTCCATGAAAACTGAAACTCCCATTAAAACAACAACCTCCACTTCATTCCTTCACCATAAGGAATCTGGTTTTCTCCATTTCGCTAAGTATCACGGTCTCGGAAACGACTTCGTTTTGATTGATAATAGAGACTCTTCTGAGCCAAAGATTAGTTCAGAGAAAGCTGTACAACTATGTGATCGTAACTTTGGTGTTGGTGCTGATGGAGTTATCTTTGTATTGCCTGGTATCGATGGTACTGATTATACAATGAGGATTTTCAACTCTGATGGTAGTGAGCCTGAGATGTGTGGCAATGGAGTGCGATGCTTTGCCAAATTTGTTTCTCAGCTTGAGAGTTTACATGGGAGGCACAGTTTCACCATACACACTGGTGCTGGGAAGATTGTTCCTGAAGTCTTGGGGGATGGAAATGTCAGAGTTGATATGGGGGAACCGGTTCTTAAAGCATCAGATGTGCCTACTAAATTATCTCCAAATAAGGATCATGCTGTTGTTAAATCAGAGATAGATGTTGATGGAAGTATCTGGAATGTGACTTGTGTTAGCATGGGAAATCCACACTGTGTAACCTTCAGCAATAAAGGAAGTCAGAATTTGCTTGTTGATGAATTGAAGCTAGCAGAAATTGGCCCAAAATTTGAACATCACGAGGTGTTCCCTGCACGAACTAACACAGAGTTTGTGCAAGTTCTTTCTAATTCTCACCTGAAGATGCGTGTTTGGGAGCGTGGTGCAGGAGCAACTCTTGCCTGTGGAACTGGAGCTTGTGCTGTAGTTGTTGCAGCAGTTCTTGAGGGTCGTGCTGGGCGAGACTGCACGGTTGATCTACCTGGAGGGCCTCTTCAGATTGAATGGAAGGATGAAGATAATCATGTCTATATGACAGGTTCTGCAGAACTAGTGTATTATGGCTCTTTGCCCCTTTGA 1086 0.4429 MAITATISVSITTPTRRSLSSINSILPSSRSISATPQPTFKYPNSRLVALASSMKTETPIKTTTSTSFLHHKESGFLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFVLPGIDGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLESLHGRHSFTIHTGAGKIVPEVLGDGNVRVDMGEPVLKASDVPTKLSPNKDHAVVKSEIDVDGSIWNVTCVSMGNPHCVTFSNKGSQNLLVDELKLAEIGPKFEHHEVFPARTNTEFVQVLSNSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAGRDCTVDLPGGPLQIEWKDEDNHVYMTGSAELVYYGSLPL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3021 361 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 37 360 IPR001653 GO:0008837|GO:0009089
Mtr7g3021 361 SUPERFAMILY Diaminopimelate epimerase-like 221 359 - -
Mtr7g3021 361 SUPERFAMILY Diaminopimelate epimerase-like 77 206 - -
Mtr7g3021 361 Pfam Diaminopimelate epimerase 79 200 IPR001653 GO:0008837|GO:0009089
Mtr7g3021 361 Pfam Diaminopimelate epimerase 233 354 IPR001653 GO:0008837|GO:0009089
Mtr7g3021 361 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 50 208 - -
Mtr7g3021 361 Hamap Diaminopimelate epimerase [dapF]. 77 361 IPR001653 GO:0008837|GO:0009089
Mtr7g3021 361 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 37 360 - -
Mtr7g3021 361 ProSitePatterns Diaminopimelate epimerase signature. 140 154 IPR018510 GO:0005737|GO:0008837|GO:0009089
Mtr7g3021 361 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 212 345 - -
Mtr7g3021 361 TIGRFAM DapF: diaminopimelate epimerase 78 359 IPR001653 GO:0008837|GO:0009089
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3021 Mtr-Chr7 47088230 47094313 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3021 K01778 - gmx:100807528 583.948