Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2978 ATGACGAGAATTCATCGGAATCGTGATCGCACCGGTAATTCTAACGGCAGCAATGTCTTTAATTTGCTTGCACGGAGAGAGATTTCACCAAGAACAAAACATGTAGCAAGAGATGCAAAGCGTGGCCTATTGTCATGGGTTGAGGCCGATTCACTGCGGCATTTATCAGCCAAGTATTGTCCTTTACTACCTGCGCCAAGGTCTACTATTGCAGCGGCGTTTAGTCCAGATGGAAAAGTTCTTGCATCCACACATGGTGACCACACAGTGAAGATAATCGACTGTGAAACTGGACGTTGCTTAAAGGTGTTAATTGGCCATATGAGGACGCCTTGGGTGGTTAGGTTCCATCCATTGCATCCAAAAATACTTGCTAGTGGGAGCTTGGATCAAGAAGTTCGATTATGGGATGCTAACACATCGGAGTGCATAACATCTCACCACTTCTATCGACCAATTGCATCCATTGCTTTTCATGCCAAAGGGGAAATAATTGCCGTTGCATCAGGCCACAAGCTGTACATATGGCACTACGACAAGAAAGGCGAAGCATCCTACTCCCCAATTTTTGTGTTAAAGACAAGGCGATCTCTACGGGCTGTTCATTTTCACCCTCATGCTGCGCCATATCTTTTAACGGCCGAGGTCAATGATCTTGACTCTTCAGATTCCTCAATGACAGAGGCAACATCCATTGGTTACTTACAATATCCTCCACCTGCTGTTTTTGTCACAAATGTTCATCCTACAGAACATGTTACTTTGTCCAGTGAACCAACTAATGTGTCATTGCCTTTCTTCCTCGTGCCTCCGTATACTGTTGATGAGTCGAGAGCAGAGTTACAGCATGCTAGTCATGACGCTGGTTCAGGTAGAATACAAATTGAGTCTTCTGCCGTGGCTCAGTTTCAAGCGGACACAAATTCAACAGAACAACATGATACTACAGTGTCTCCCATGGATACAGTCTCGGAGATTCCCACTAACTCTCAAGCTGGTACAGAATATCCTGCGCATACTGCTTTCTCTAATGGAATGGGAATTGGCATCGGCAACCTCACAATGGACGGTATGGAGACTGATGAAACAAGACCGGCTGAAGGAAGTCAACACAGAAACCCTACCGATGCAAGTTCTCTTAATGGTATGTTACATGGATTATCTAGACAAACCGCAAATCATGGGGTTCATCCAGAGGATGGTCATCCGTTTGTTTCTTCAAGAGACCCAAGTGGATGGGAATTACCTTTTCTACAAGGATGGATGATGGGTCAAAGCCAAGCTGGTCTCCCCTCAATGCTACCTCACACGGGTGTTAGTCGTGACACTCTAGCTCCACAGATTAGTTCTAGTGTAATGGCTAATACTCTTCCCACTTCTAATGCTGATGTAGCAATGCCATCTTCAGCAATGTCTGGCAGCATTAACATACCCGGATCTTCTGTAAGATCAGGTTTGCGGAGTCATTTTTCACACTCACGGACACCTGTATCTGAATCTGGAAATCTTGCTGCTTCTATTAATACCCCACATGATGGATCTGACATCCAAACCATCATGAGTCGAATCCAGTCAGAACTCGCAACGTCTGTGGCTGCAGCGGCAGCTACCGAGCTGCCTTGTACCGTGAAGTTAAGGGTGTGGTCTCATGACATAAAAAATCCCTGTTCCCCACTAAATGCTGACAGATGTCGTCTAATTATACCTCATGCCGTCCTCTGCAGTGAAATGGGTGCTCACTTTTCACCATGCGGTAGATTTTTAGCTGCCTGTGTTGCATGTATGCTTCCTCATATAGAAGCTGATCCTGGATTACAAACTCCAGTACATCAAGAGTCTGGTATTGCAACATCACCAACTCGGCATCCAATATCAGCACACCAAGTTATGTATGAGCTGCGGATATATTCCCTTGAGGAGGCAACATTTGGGTTGGTGCTTGCGTCTCGGGCAATTAGAGCAGCTCATTGTCTGACTTCAATTCAGTTCTCACCTACATCTGAGCACATACTCCTTGCCTATGGTCGACGTCATGGTTCTCTTCTTAAAAGCATTGTCATTGATGGAGAAACAACATTACCTATATATACAGTATTAGAGGTATATAGAGTTTCAGATATGGAACTTGTTAGGGTGCTTCCGAGTGCTGAAGATGAGGTCAATGTGGCATGCTTTCATCCTTTTCCCGGGGGCGGGCTAGTTTATGGAACAAAGGAAGGAAAGCTTAGGATCCTCCACTATGATGGTGCTCGCCCGGTGAATGGGACTGGACCAAGTTACTTTCCTGAGGAGACCATCGTTGGAGTCAGTCAGTGA 2316 0.4551 MTRIHRNRDRTGNSNGSNVFNLLARREISPRTKHVARDAKRGLLSWVEADSLRHLSAKYCPLLPAPRSTIAAAFSPDGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPKILASGSLDQEVRLWDANTSECITSHHFYRPIASIAFHAKGEIIAVASGHKLYIWHYDKKGEASYSPIFVLKTRRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTEATSIGYLQYPPPAVFVTNVHPTEHVTLSSEPTNVSLPFFLVPPYTVDESRAELQHASHDAGSGRIQIESSAVAQFQADTNSTEQHDTTVSPMDTVSEIPTNSQAGTEYPAHTAFSNGMGIGIGNLTMDGMETDETRPAEGSQHRNPTDASSLNGMLHGLSRQTANHGVHPEDGHPFVSSRDPSGWELPFLQGWMMGQSQAGLPSMLPHTGVSRDTLAPQISSSVMANTLPTSNADVAMPSSAMSGSINIPGSSVRSGLRSHFSHSRTPVSESGNLAASINTPHDGSDIQTIMSRIQSELATSVAAAAATELPCTVKLRVWSHDIKNPCSPLNADRCRLIIPHAVLCSEMGAHFSPCGRFLAACVACMLPHIEADPGLQTPVHQESGIATSPTRHPISAHQVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMELVRVLPSAEDEVNVACFHPFPGGGLVYGTKEGKLRILHYDGARPVNGTGPSYFPEETIVGVSQ* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2978 771 MobiDBLite consensus disorder prediction 485 504 - -
Mtr7g2978 771 ProSiteProfiles Trp-Asp (WD) repeats profile. 104 146 IPR001680 GO:0005515
Mtr7g2978 771 ProSitePatterns Trp-Asp (WD) repeats signature. 124 138 IPR019775 -
Mtr7g2978 771 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 6 37 - -
Mtr7g2978 771 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 36 770 - -
Mtr7g2978 771 Pfam WD domain, G-beta repeat 98 137 IPR001680 GO:0005515
Mtr7g2978 771 Pfam WD domain, G-beta repeat 71 94 IPR001680 GO:0005515
Mtr7g2978 771 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 104 142 - -
Mtr7g2978 771 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 6 37 - -
Mtr7g2978 771 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 36 770 - -
Mtr7g2978 771 SMART WD40_4 56 94 IPR001680 GO:0005515
Mtr7g2978 771 SMART WD40_4 140 177 IPR001680 GO:0005515
Mtr7g2978 771 SMART WD40_4 706 746 IPR001680 GO:0005515
Mtr7g2978 771 SMART WD40_4 97 137 IPR001680 GO:0005515
Mtr7g2978 771 MobiDBLite consensus disorder prediction 353 382 - -
Mtr7g2978 771 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 63 749 IPR011047 -
Mtr7g2978 771 Gene3D - 43 227 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2978 Mtr-Chr7 46602060 46606418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2978 71 239 Miscellaneous Gene Families AT5G08390 24.176 1.10e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2978 - K17985 gmx:100817857 1295.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2978 7 46602060 46606418 Mtr7g2978 7 46602060 46606418 ECH