Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2963 ATGGAGGACTCAGGTGAAATATACGACGGCGTAAGAGCCGAATTCCCTCTTTCTTTCGGAAAACAATCGAAATCTCAAACCCCTCTCGAAACCATTCACAAAGCCACTCGTCGTTCTGTTCCCACTTCCAATCCCAAAACCACTAGCGATGATTTTCCTTCCAAGGAATGCCTTCATTCCATTCGTCCCCCCAAAAACCCTAACCCTCCATCTCCTCCTCTCCAAGACGATTCTCCCCTCGTCGGACCACCTCCACCGCCGCCACATCATGAAGCCGATGATGATGACGGTGAGATGATTGGCCCTCCACCACCGCCACCTGGTTCCAATTTCAATGATTCTGAAGACGAAGACAATGATTCCGATCAAGATGAACTTGGAAACCGCTTTCGTATTCCTCTTAGTAACGAGATTGTCCTCAAAGGTCATACTAAGGTTGTGTCGGCTCTTGCTGTGGATCACACGGGGTCCAGAGTACTATCTGGAAGTTATGACTATATGGTTCGTATGTATGACTTTCAAGGAATGAATTCTCGTCTGCAATCGTTTCGACAAATCGAGCCGTCTGAAGGCCATCAAATTCGCAATTTAAGCTGGAGTCCAACTGCAGATCGTTTTTTGTGTGTGACAGGATCAGCTCAAGCTAAGATTTATGATCGTGATGGCCTCACTCTTGGTGAGTTTGTAAAGGGAGACATGTATATTCGTGATCTAAAGAATACCAAGGGTCATATAACTGGATTGACATGTGGTGAGTGGCACCCAAAAACTAAGGAGACCATTTTGACATCATCAGAGGATGGGTCGCTCCGCATATGGGATGTAAATGACTTCACAACTCAGAAGCAGGTCATTAAACCAAAGCTTGCGAGACCTGGAAGAGTTCCTGTCACCACATGTGCATGGGATTATGATGGTAAATGCATTGCTGGTGGTATAGGAGATGGTTCTATACAGGTTTGGAGTATTAAACCTGGATGGGGGAGTAGGCCTGATATACATTTTGAAAAATGTCACGAAGATGATATTACTAGTCTGAAATTTTCTGCTGATGGGAGAATCTTATTGTCAAGGAGCTTTGATGATTCATTGAAGGTTTGGGATCTGCGCAAAACAAAAGAAGCCTTGAAGGTATTTGAAGAACTGCCAAACCATTATGGACAAACAAATGTCGGCTTCAGTCCTGACGAGCAACTATTTTTTACTGGAACTTCTGTAGAAAAGGATAGCACAACAGGAGGTTTACTATGCTTCTTTGATAGAGTAAATCTCGAGCTTGTTTCAAAAGTTGGCATATCCCCCACTTGCAGTGTTGTTCAGTGTTCTTGGCATCCTAAACTGAATCAGATCTTCGCATCTGTTGGTGATAAAAGCCAAGGAGGGACTCACATACTATATGATCCAACCATCAGTGAGAGAGGAGCTCTTGTTTGTGTTGCACGTGCACCAAGGAAAAAATCAGTTGATGATTTTGTAGCAAATCCTGTAATACACAATCCTCATGCTTTACCTCTATTTAGAGATCAGCCAAACCGCAAGCGTCAGCGAGAGAAGGTATTAAAAGATCCATTGAAGTCACATAAGCCTGAAATGCCCATGACAGGACCTGGCTTTGGTGGACGAGTTGGTACAAGTCAAGGAAGTTTACTGACCCAGTATCTACTAAAGAAAGGGGGCATGATTAAGGAGACATGGATGGATGAAGATCCAAGGGAAGCTATCCTAAAATATGCTGATGTTGCAGCAAAGGAACCAAAGTTCATAGCTCCAGCATATGCTGAAACTCAACCTGAGCCTTTGTTTGCGAAGTCAGATTCTGAGGATGAAGAGAAATGA 1836 0.4385 MEDSGEIYDGVRAEFPLSFGKQSKSQTPLETIHKATRRSVPTSNPKTTSDDFPSKECLHSIRPPKNPNPPSPPLQDDSPLVGPPPPPPHHEADDDDGEMIGPPPPPPGSNFNDSEDEDNDSDQDELGNRFRIPLSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPSEGHQIRNLSWSPTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHPKTKETILTSSEDGSLRIWDVNDFTTQKQVIKPKLARPGRVPVTTCAWDYDGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRILLSRSFDDSLKVWDLRKTKEALKVFEELPNHYGQTNVGFSPDEQLFFTGTSVEKDSTTGGLLCFFDRVNLELVSKVGISPTCSVVQCSWHPKLNQIFASVGDKSQGGTHILYDPTISERGALVCVARAPRKKSVDDFVANPVIHNPHALPLFRDQPNRKRQREKVLKDPLKSHKPEMPMTGPGFGGRVGTSQGSLLTQYLLKKGGMIKETWMDEDPREAILKYADVAAKEPKFIAPAYAETQPEPLFAKSDSEDEEK* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2963 611 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 140 174 - -
Mtr7g2963 611 PANTHER GASTRULATION DEFECTIVE PROTEIN 1-RELATED 4 611 - -
Mtr7g2963 611 MobiDBLite consensus disorder prediction 589 611 - -
Mtr7g2963 611 PRINTS G protein beta WD-40 repeat signature 261 275 IPR020472 -
Mtr7g2963 611 PRINTS G protein beta WD-40 repeat signature 309 323 IPR020472 -
Mtr7g2963 611 PRINTS G protein beta WD-40 repeat signature 355 369 IPR020472 -
Mtr7g2963 611 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 241 276 - -
Mtr7g2963 611 ProSiteProfiles Trp-Asp (WD) repeats profile. 140 181 IPR001680 GO:0005515
Mtr7g2963 611 SUPERFAMILY WD40 repeat-like 119 456 IPR036322 GO:0005515
Mtr7g2963 611 ProSitePatterns Trp-Asp (WD) repeats signature. 261 275 IPR019775 -
Mtr7g2963 611 MobiDBLite consensus disorder prediction 63 87 - -
Mtr7g2963 611 MobiDBLite consensus disorder prediction 509 528 - -
Mtr7g2963 611 Pfam WD domain, G-beta repeat 138 172 IPR001680 GO:0005515
Mtr7g2963 611 Pfam WD domain, G-beta repeat 337 368 IPR001680 GO:0005515
Mtr7g2963 611 Pfam WD domain, G-beta repeat 296 322 IPR001680 GO:0005515
Mtr7g2963 611 Pfam WD domain, G-beta repeat 239 274 IPR001680 GO:0005515
Mtr7g2963 611 ProSiteProfiles Trp-Asp (WD) repeats profile. 336 377 IPR001680 GO:0005515
Mtr7g2963 611 ProSiteProfiles Trp-Asp (WD) repeats profile. 241 283 IPR001680 GO:0005515
Mtr7g2963 611 MobiDBLite consensus disorder prediction 1 127 - -
Mtr7g2963 611 Gene3D - 88 228 IPR015943 GO:0005515
Mtr7g2963 611 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 336 370 - -
Mtr7g2963 611 MobiDBLite consensus disorder prediction 19 51 - -
Mtr7g2963 611 Gene3D - 229 470 IPR015943 GO:0005515
Mtr7g2963 611 SMART WD40_4 328 368 IPR001680 GO:0005515
Mtr7g2963 611 SMART WD40_4 280 322 IPR001680 GO:0005515
Mtr7g2963 611 SMART WD40_4 231 274 IPR001680 GO:0005515
Mtr7g2963 611 SMART WD40_4 179 219 IPR001680 GO:0005515
Mtr7g2963 611 SMART WD40_4 133 172 IPR001680 GO:0005515
Mtr7g2963 611 MobiDBLite consensus disorder prediction 509 541 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2963 261 441 Miscellaneous Gene Families AT5G08390 26.374 5.81e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2963 K24752 - gmx:100815380 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2963 7 46469997 46474668 Mtr7g2963 7 46469997 46474668 ECH