Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2955 ATGGAAGAAGGAGGAGGAAGTGAGTTGAAGGCAATGGATGCTGAGCAACTGAGAGAACAAGGTCATATGATGGTTGATTTCATTGCTGATTACTACAAAACCATTGAAAATTTTCCAGTTCTTAGCCAAGTTCAGCCAGGTTATCTTGGAAAGCTTCTTCCAGATTCTGCTCCTACTCATCCTGAATCATTGCAACATGTTTTAAATGATGTACAGGAAAAGATACTACCTGGGGTGACACATTGGCAAAGCCCTAACTATTTTGCATATTTTCCATCCAATAGTAGCATTGCTGGTTTTTTAGGAGAGATGCTTAGTGCTGGTCTCAGCATTGTGGGTTTCAGCTGGATATCTTCTCCTGCTGCAACTGAACTCGAAACGATTGTCCTCGACTGGCTTGCCAAAGCACTCCTTCTGCCTCATGATTTCTTTTCTACAGGGCAAGGGGGTGGAGTTATACAGGGAACAGCAAGTGAAGCTGTGCTAGTAGTGTTGGTGGCTGCCCGTGACAAGATCCTGCGGACAGTTGGAAGGAGTGCCCTTCCTAAGCTTGTGACATATGCATCTGACCAAACACACTCTTCTTTACAAAAAGCTTGCCAGATAGCAGGACTTAATCCAGAGCTCTGCAGGTTGCTTAAAACCGATTCTTCCACAAATTTTGCGCTTTCCCCTGATGTACTTTCTGAAGCAATTTCAAATGACATTGCCAGTGGTCTTACACCCTTTTTCTTATGTGCTACCGTTGGTACTACTTCATCAACAGCTGTTGATCCTCTACCTGCATTGGCAAAAGTCACTAAGCCCAACAATATTTGGCTTCATGTGGATGCTGCTTATGCTGGAAGCGCTTGTATATGTCCAGAGTACCGCCACTTCATTGATGGGGTTGAAGAAGCAGATTCATTTAACATGAATGCACATAAATGGTTCCTTACTAACTTCGACTGTTCAGTGCTTTGGGTTAAGGACAGAAGTGCTCTGATTCAGTCGCTGTCTACAAATCCAGAATTTCTGAAAAATAAGGCCTCTCAAGAAAACACGGTCATAGATTATAAAGACTGGCAAATTCCTCTTGGGCGTCGGTTTAGATCATTAAAACTGTGGATGGTGATGCGACTCTATGGATTGGAAGGCCTGCGAACTCACATAAGAAGCCACATTGCACTGGCAGTTTATTTTGAGGAGCTTGTTGTTCAAGACACTAGATTCAAGGTTGTTGCGCCTCGAACATTCTCTTTAGTTTGTTTTCGTCTTTTGCCTCCCCAAAACTCTGAAGATAATGGCAATAAACTGAACCATGATCTACTTGATGCAGTAAATTCAACGGGAGATGTTTTCATTACACACACGGTTCTATCAGGTGAATACATTCTACGTCTCGCAGTAGGAGCACCGTTGACAGAAGTGAGGCATGTCCATGCAGCGTGGCAGATTTTGCAAGAAAAAGCCACTGCTCTATTAGAGAGTTTATAG 1476 0.4322 MEEGGGSELKAMDAEQLREQGHMMVDFIADYYKTIENFPVLSQVQPGYLGKLLPDSAPTHPESLQHVLNDVQEKILPGVTHWQSPNYFAYFPSNSSIAGFLGEMLSAGLSIVGFSWISSPAATELETIVLDWLAKALLLPHDFFSTGQGGGVIQGTASEAVLVVLVAARDKILRTVGRSALPKLVTYASDQTHSSLQKACQIAGLNPELCRLLKTDSSTNFALSPDVLSEAISNDIASGLTPFFLCATVGTTSSTAVDPLPALAKVTKPNNIWLHVDAAYAGSACICPEYRHFIDGVEEADSFNMNAHKWFLTNFDCSVLWVKDRSALIQSLSTNPEFLKNKASQENTVIDYKDWQIPLGRRFRSLKLWMVMRLYGLEGLRTHIRSHIALAVYFEELVVQDTRFKVVAPRTFSLVCFRLLPPQNSEDNGNKLNHDLLDAVNSTGDVFITHTVLSGEYILRLAVGAPLTEVRHVHAAWQILQEKATALLESL* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2955 491 Gene3D - 93 385 IPR015421 GO:0003824
Mtr7g2955 491 Gene3D - 7 92 - -
Mtr7g2955 491 Gene3D Aspartate Aminotransferase, domain 1 386 491 IPR015422 GO:0003824
Mtr7g2955 491 SUPERFAMILY PLP-dependent transferases 12 485 IPR015424 -
Mtr7g2955 491 Pfam Pyridoxal-dependent decarboxylase conserved domain 46 419 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mtr7g2955 491 CDD DOPA_deC_like 87 482 - -
Mtr7g2955 491 PANTHER GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE 12 490 - -
Mtr7g2955 491 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 302 323 IPR021115 GO:0016831
Mtr7g2955 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 17 36 IPR010977 GO:0006520|GO:0016831
Mtr7g2955 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 40 57 IPR010977 GO:0006520|GO:0016831
Mtr7g2955 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 58 77 IPR010977 GO:0006520|GO:0016831
Mtr7g2955 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 84 103 IPR010977 GO:0006520|GO:0016831
Mtr7g2955 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 105 123 IPR010977 GO:0006520|GO:0016831
Mtr7g2955 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 124 143 IPR010977 GO:0006520|GO:0016831
Mtr7g2955 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 149 169 IPR010977 GO:0006520|GO:0016831
Mtr7g2955 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 358 373 IPR010977 GO:0006520|GO:0016831
Mtr7g2955 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 401 420 IPR010977 GO:0006520|GO:0016831
Mtr7g2955 491 PANTHER BNAA07G00240D PROTEIN 12 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2955 Mtr-Chr7 46355526 46361075 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2955 K01593 - gmx:100791074 843.573