Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2945 ATGTTGCTAAGAAGCTCTTCAACACCAGTTCTTGGTTCTCTCCTATCTTCTTCCGGTTCCTTCACAGATAGTCCTATTCATCATCATACTCATAGTCTTCACCCTGAATCATATCAAGCACTTAAGCATCTACCACCAACCGCTTCTTCACTCCAACATCATCATCACAATCACAAACTCTCATGCACTTCTTCTCCAATTTCTCCTTCCATTTCTGATCTTGAAAGACAAAACAAAGGGTTGATTAGAAGAGTTCAATCTGAAGGGAACTTGGAAGACTTAGCCTATGCCACTAATTGTAACAACAATATGGACTCTTCTTCTAAAAGGTATTCAGTGAGACAAAGAGGCTTCGCACTAGAGACCATTCCATCTTTCTCTCTTTCAAAGCAAACAGGCTTGCGTGAAGAAGAAACTGATTTTGAAGATGAAGGATATGATGATGATTTCAGTAGTGTGCTGAATAGTACTGCCAGTGGTGTGGTGGTGAATGATGAAGTGAAGGATAGAGTTTTCAGGGTGAGTTTTGGTGAGGAGGGAAAGGTTGGTAATAAAGAAATGTATCTTGCAAAGGGACTTGGTGTTGATGGTATAGGTGGCTGCAGTGGAGGGAATGGAGGTGGTGATTATAATTCCATGGGTTCTGGAGGGAATGATGGAGATAGTAATCATGGGGTGGAAGAATATTACAAGAAAATGGTTCAACAAAATCCAGGAAATCCATTGTTTCTGAGGAATTATGCTCAGTTTCTGTATCAGTGCAAACAAGACCGTGAAGGAGCAGAGGAATATTATTCCAGAGCCATACTAGCAGATCCAAATGATGGAGAAGTTCTGTCACAGTATGGAAAGCTAGTTTGGGAGTTACATCGTGATGAAGAAAGAGCATCCAGCTATTTTGAACGAGCAGTCCAAGCATCTCCTGATGACAGTCATGTACAAGCAGCATATGCAAGCTTCCTTTGGGACACAGAGGAAGACGAGGATGCAGCAGGTTCCAATGACCCACAATGTTTGCCTCAACATTTTCATTTTGGAGCTATGGCAACTACAGGTGCTTAA 1062 0.4171 MLLRSSSTPVLGSLLSSSGSFTDSPIHHHTHSLHPESYQALKHLPPTASSLQHHHHNHKLSCTSSPISPSISDLERQNKGLIRRVQSEGNLEDLAYATNCNNNMDSSSKRYSVRQRGFALETIPSFSLSKQTGLREEETDFEDEGYDDDFSSVLNSTASGVVVNDEVKDRVFRVSFGEEGKVGNKEMYLAKGLGVDGIGGCSGGNGGGDYNSMGSGGNDGDSNHGVEEYYKKMVQQNPGNPLFLRNYAQFLYQCKQDREGAEEYYSRAILADPNDGEVLSQYGKLVWELHRDEERASSYFERAVQASPDDSHVQAAYASFLWDTEEDEDAAGSNDPQCLPQHFHFGAMATTGA* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2945 353 Gene3D Tetratricopeptide repeat domain 217 332 IPR011990 GO:0005515
Mtr7g2945 353 MobiDBLite consensus disorder prediction 48 71 - -
Mtr7g2945 353 PANTHER OSJNBA0004N05.2 PROTEIN 1 336 - -
Mtr7g2945 353 SUPERFAMILY TPR-like 227 331 IPR011990 GO:0005515
Mtr7g2945 353 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 336 - -
Mtr7g2945 353 SMART hat_new_1 291 323 IPR003107 GO:0006396
Mtr7g2945 353 SMART hat_new_1 256 288 IPR003107 GO:0006396
Mtr7g2945 353 SMART hat_new_1 221 253 IPR003107 GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2945 Mtr-Chr7 46251367 46253407 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2945 - - mtr:MTR_7g098450 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2945 7 46251367 46253407 Mtr7g2945 7 46251367 46253407 ECH