Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2943 ATGGGAGATAGTGAAACAATGGTTGCAGAAGCATCTGCTGCTGAGACGTATCCATCTGATGGTTACAACAACACTTCTTCGAATCCTGTTCCCGAGGCTGGTGCTAATGTTCCTGCTCCTGCTGAGATTGCAGGAGAAGCTGCTGCTGCTCAGCCCAATTCAGGCTATGCATTTGCTTATTCTGGTGATGGGAATGCTTATACTGCTGGGGATCCTAATTCTGTACTACAAGCTCAATTTAGTGCAACAAATGAGTCAAAGCAAGCTGCTGAAGTGCCTAATGAGGATTCCAGTCTGGTTGGAAAGGAAGCTATGGATTCTGCTATGGTCTCTGCTGACCATTCATCTGTAAATGGAAGTGTTGATACAGTTGGACTTGAAAATGGAAATGCATCAGAGAATGTTGATGAGTCAGCTGATGAGAAACAACTCACAGATGCTTACGCTGCGTTGTCTGCTGAAGAAGATCGATTGTGGAATATTGTAACTGCTAATTCTTCTGATTTTACTGCTTGGACTTCTTTGATTGACGAGACAGAGAAGGTGGCAGAGAACAATATTTTGAAGATGCGTAGAGTCTATGATGCTTTCCTAGCAGAATTCCCTTTGTGTTATGGGTATTGGAAGAAATATGCTGACCATGAGGCGCGCCTTGGCTCTGCCGATAAAGTTGTTGAAGTTTATGAACGTGCTGTTCAAGGGGTTACATATTCAGTGGACATGTGGTTGCATTATTGCATATTCGCTATAAGCACCTATGGAGATCCAGACACAGTTCGTAGGCTTTTTGAACGAGGATTAGCTTATGTTGGAACAGATTATCTTTCGTTTCCTCTTTGGGATAAATACATTGAATATGAGTACATGCAGCAAGACTGGGCCCGTCTTGCAATGATTTACACCAGAATATTAGAGAATCCAAATCAGCAGTTGGATCGATATTTCAACAGCTTCAAGGAGTTGGCTAGTAATCGACCTCTTTCAGAATTACGGACAGCTGATGAAGCTGCTGCAGTGGCAGGTGTTGTTTCAGAGGGTATTGACCAAGGTGTTGAAGGAGAGGTTCATCCTGATGGTGCAGATAATTCTCCCAAACCTGCAAGTGCTGGATTAACAGAAGCGGAAGAGTTGGAGAAGTATATTGCCATTAGAGAAGAGATGTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAACTATCAGGAGGCCCTACTTTCACGTACGTCCTCTTAATATTGGGGAGCTTGAAAATTGGCATAATTATCTGGACTTTATAGAAAGAGAAGGTGACTTGAGCAAGATTGTCAAGTTGTATGAGAGATGCGTCATTGCCTGTGCCAATTATCCCGAGTACTGGATACGCTATGTTTTGTGTATGGAAGCTAGTGAAAGTATGGATCTTGCAAATAATGTTCTCGCTCGGGCGAGCCAAGTTTTTGTCAAGAGACAACCCGAGATACATCTTTTTTGTGCTCGGTTCAAGGAGCAGGCTGGAGATATAGTTGGCGCTAGAGCTGCGTATCAACTTGTACACACTGAAATTTCTCCAGGTCTTCTTGAAGCAATAATCAGGCATGCCAATATGGAACATCGACTGGGGAAGTTGGAGGATGCCTTCTCTTTGTATGAACAGGCCATTGCCATTGAGAAAGGAAAAGAACATTCACAAACACTGCCAATGTTGTTTGCTCAGTATTCTCGATTTGTTTATTTGGCTTCTGGGAATTCCGAAAAGGCTAGAGAGATTTTAGTTGGAGGACTTGAGAATGCTTCACTGTCAAAGCCACTACTTGAGGCTTTATTGCATTTTGAGGCTATTCAACCCCAGCCAAAGCGAGTTGACATCGACTTTCTAGAGTCACTGGTTGTAAAATTCATAACACCCAACCCAGAGAACCCTGGTGTAGCAAGTGCAACAGAGCGCGAGGAGCTTTCTAACATTTTTCTGGAGTTTTTAAATCTCTTTGGAGATGTTCAATCGATCAAAAGGGCTGAGGATAGACATGCCAAACTGTTCTTGCCAAACAGGGGCTTGTCGGAGTTGAAAAAACGTCATGCAGAGGATTTCTTAGCCTCAGATAAAACAAAAGTGTCAAGAGCTTATTCTGCTCAATCACCTGCCCAATCTGTAGCGGGTGCATATCCAAATGGACCTAACCAATGGCCTAACTATGGAGTACAGCCTCAAACTTGGCCAGCAACCACTCAAGCACAAGGACAACAGTGGCCTGCTGGCTACACCCAGCAGCAGGCTGCCGCTTCCTATGGGGCTTATGCTGGATATGGAGGCAACTATGCTAACCCACAATTGCCTGCATCAGTTCCACAAAGCACTGCATATGGGGCCTATCCTCCTGCATATCCTGCACAGCCAGCACTGCCTCAACAAAATTATGCACAGCCTGTTGCAGCCCCGACACAGCAACCTGCAGCCGTTCCTCAGGCATATTATGGGAATTACTACTGA 2481 0.4414 MGDSETMVAEASAAETYPSDGYNNTSSNPVPEAGANVPAPAEIAGEAAAAQPNSGYAFAYSGDGNAYTAGDPNSVLQAQFSATNESKQAAEVPNEDSSLVGKEAMDSAMVSADHSSVNGSVDTVGLENGNASENVDESADEKQLTDAYAALSAEEDRLWNIVTANSSDFTAWTSLIDETEKVAENNILKMRRVYDAFLAEFPLCYGYWKKYADHEARLGSADKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLAMIYTRILENPNQQLDRYFNSFKELASNRPLSELRTADEAAAVAGVVSEGIDQGVEGEVHPDGADNSPKPASAGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETTIRRPYFHVRPLNIGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASESMDLANNVLARASQVFVKRQPEIHLFCARFKEQAGDIVGARAAYQLVHTEISPGLLEAIIRHANMEHRLGKLEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNSEKAREILVGGLENASLSKPLLEALLHFEAIQPQPKRVDIDFLESLVVKFITPNPENPGVASATEREELSNIFLEFLNLFGDVQSIKRAEDRHAKLFLPNRGLSELKKRHAEDFLASDKTKVSRAYSAQSPAQSVAGAYPNGPNQWPNYGVQPQTWPATTQAQGQQWPAGYTQQQAAASYGAYAGYGGNYANPQLPASVPQSTAYGAYPPAYPAQPALPQQNYAQPVAAPTQQPAAVPQAYYGNYY* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2943 826 SUPERFAMILY TPR-like 378 678 IPR011990 GO:0005515
Mtr7g2943 826 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 1 813 - -
Mtr7g2943 826 Gene3D Tetratricopeptide repeat domain 160 329 IPR011990 GO:0005515
Mtr7g2943 826 MobiDBLite consensus disorder prediction 1 37 - -
Mtr7g2943 826 PANTHER PRE-MRNA-PROCESSING FACTOR 39 1 813 - -
Mtr7g2943 826 MobiDBLite consensus disorder prediction 17 32 - -
Mtr7g2943 826 Gene3D Tetratricopeptide repeat domain 414 710 IPR011990 GO:0005515
Mtr7g2943 826 SMART hat_new_1 538 573 IPR003107 GO:0006396
Mtr7g2943 826 SMART hat_new_1 434 466 IPR003107 GO:0006396
Mtr7g2943 826 SMART hat_new_1 291 324 IPR003107 GO:0006396
Mtr7g2943 826 SMART hat_new_1 185 217 IPR003107 GO:0006396
Mtr7g2943 826 SMART hat_new_1 254 289 IPR003107 GO:0006396
Mtr7g2943 826 SMART hat_new_1 219 251 IPR003107 GO:0006396
Mtr7g2943 826 SUPERFAMILY TPR-like 162 324 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2943 Mtr-Chr7 46233866 46242785 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2943 K13217 - gmx:100787373 1278.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2943 7 46233866 46242785 Mtr7g2943 7 46233866 46242785 ECH