Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2908 ATGGACAAATCAAAGCTAGCTCAATTCGGCGAGAGGCTCAAAACCAGCAGCGCCAACATGAGTCGAATCGTAAGCGGCAAAATGAAAGAAATTCTCCAAACTCCAACACCTGAATCCAAAATTGTCGACGAAGCAACATCCGAAACTTTATCTGAACCAAATTGGGGTATGAATCTCAGAATCTGCGGCCTTATTAATGCCGAAGAGTTTAACGGTTCTGAAATAGTGAAAGCTATTAAGAGAAAGATCAATCATAAGAGTCCTATTGTTCAGAAACATAGCCTTGATTTGTTGGAGACTTGTGCTATGAATTGTGATAAAGTGTTTTCGGAAATTGCTTCTGAGAAGGTTCTTGATGATATGGTTAGGTTGATTGAGAATAATCAGGGTGATGGTGGGAATAGAAGAAGGGCGTTTCAGTTGGTTAGAGCTTGGGGTGAGTCTCAGGACATTGCTTATCTTCCTGTTTTCAGTCAGACTTATATGAGTTTGAAAGGAAGGGGTGAATCACTTGACATGACGACAGGAAATTCACCACCTATTCCGTATGCCTCAGAGTCAAGTGCTTATCAACATCCTTTAGATCCCCCTGAAAGATACCCAGTTCCAGAAGCAGGGCTACATGCTCTTGCTCTGGACGACTCGGCAGCTTTCTTTTCTGATCACCAACCAGCATCAGCTGAAGAGAAGAAAGAGCATCTTGTGGTTGCTCGAAACAGTCTTGAATTGCTCTCTAGCATATTAAATTCTGAGGCAGAGCCAAAACCTTTAAAGGAAGATTTAACTTTGAGTCTGCTGGATAAGTGCAAGCAATCACTCTTTCTTATCAAGGAGATTGTGGAAAGCACCGCAAATGACGAAGAGACACTTTTTGAGGCTTTATATCTCAATGATGAGCTGCAGCAGTTGGTTTCTAAGTATGAAGAGTTGGAAGCTTCAAGTTCAGAGGCACAAAGTGTTGACACTGCAGGGCACGATGCAGAAGCTGTTCAAAACCCCACCGAAAGGCGTGAAGTGGAAGCTGTTCAAAATCCCACTGAACGGCGTGAAGTGGAAGCTGTTCAAAATCCCACCGAAAGGCGTGAAGGTGATGAGTCCGAAGAGCTGTCAGAAGCTGCTCAGAGTCTTGATCGAAAGCTGCCTCAAAAGTCAAACACCTGTGAAGTCGTTGTCGATGCAACCGAGGGGGTTAGTCATGTTGAAACCAAAATAGTGGATAGCACGAAAGAGAAGAATGTTGAACCTAGCCTCAAGACTAATACCGAATGA 1269 0.435 MDKSKLAQFGERLKTSSANMSRIVSGKMKEILQTPTPESKIVDEATSETLSEPNWGMNLRICGLINAEEFNGSEIVKAIKRKINHKSPIVQKHSLDLLETCAMNCDKVFSEIASEKVLDDMVRLIENNQGDGGNRRRAFQLVRAWGESQDIAYLPVFSQTYMSLKGRGESLDMTTGNSPPIPYASESSAYQHPLDPPERYPVPEAGLHALALDDSAAFFSDHQPASAEEKKEHLVVARNSLELLSSILNSEAEPKPLKEDLTLSLLDKCKQSLFLIKEIVESTANDEETLFEALYLNDELQQLVSKYEELEASSSEAQSVDTAGHDAEAVQNPTERREVEAVQNPTERREVEAVQNPTERREGDESEELSEAAQSLDRKLPQKSNTCEVVVDATEGVSHVETKIVDSTKEKNVEPSLKTNTE* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2908 422 Pfam GAT domain 238 311 IPR004152 GO:0035091|GO:0043130
Mtr7g2908 422 ProSiteProfiles GAT domain profile. 187 312 IPR004152 GO:0035091|GO:0043130
Mtr7g2908 422 MobiDBLite consensus disorder prediction 314 385 - -
Mtr7g2908 422 SUPERFAMILY ENTH/VHS domain 34 168 IPR008942 -
Mtr7g2908 422 Coils Coil 293 320 - -
Mtr7g2908 422 ProSiteProfiles VHS domain profile. 45 172 IPR002014 GO:0035091|GO:0043130
Mtr7g2908 422 CDD VHS 39 165 - -
Mtr7g2908 422 Gene3D - 215 314 IPR038425 -
Mtr7g2908 422 MobiDBLite consensus disorder prediction 330 374 - -
Mtr7g2908 422 Gene3D - 28 183 IPR008942 -
Mtr7g2908 422 Pfam VHS domain 39 147 IPR002014 GO:0035091|GO:0043130
Mtr7g2908 422 SUPERFAMILY GAT-like domain 193 311 - -
Mtr7g2908 422 PANTHER TOM1-LIKE PROTEIN 1 1 361 IPR044836 GO:0035091|GO:0043130|GO:0043328
Mtr7g2908 422 PANTHER TOM1-LIKE PROTEIN 2 1 361 - -
Mtr7g2908 422 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2908 Mtr-Chr7 45822688 45826921 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2908 - - mtr:MTR_7g097010 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2908 7 45822688 45826921 Mtr7g2908 7 45822688 45826921 ECH