Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2878 ATGTCTGCGAATTCGCTAAACGACGTTGCTTCGTGCTCATCAGAGATGGAGAAGTTCCTGTGCGAGTTGCTGTTGGACTCAACCCAGCCAATCTCCGAACGCTTCAGAGCACTCTTCTCTCTTCGCAACCTCAAAGGCCCCGCCCCTCGCACCGCCCTTATTCTCGCGACAAGAGATTCATCAAATTTGTTGGCACACGAAGCTGCATTTGCATTAGGGCAAATGCAAGAACTCGAAGCCATACCTGCTTTAACCTCAGTTCTTAATGATCTTTCCTTGCATCCCATTGTTCGCCATGAGGCAGCTGAAGCACTAGGCGCTATTGGTTCAGATAGTAATGTTTCTCTTTTGAAGCATAGTTTGGATTCTGATCCAGCTCAAGAGGTTCGAGAAACATGTCAATTAGCTCTTCAACGTATTCTCAATTTAAAACATGCTGCTGCTACTGATGATTCGACCGCACCTGGTATTTCTCCGTTTAAGTCTGTTGATCCTGCGGCACCGGCCAGCTCTTGTTCTTCAGTTAGTCAACTAAGGGATTTACTTCTCGATGAGGAAAAAGGGATGTATGAGCGCTATGCAGCTCTTTTTTCACTTCGAAATGATGGCGGAAATGAAGCTGTTGCTGCTATTGTTGATTCCTTGGGTTCCAAGAGTGCTTTACTGAAACATGAGGTTGCATATGTTTTGGGCCAATTGCAAGACAAAGCTGCTTCAGCTGCTCTATCCAATATACTTAGAGATGTGAATGAGCATCCAATGGTTAGACATGAGGCTGCTGAAGCTCTTGGTTCAATTGCAGATGACCAAAGTGTATCCCTTCTTGAGGAATTTTCGGCAGACCCAGAGCCTCTTGTTGCACAAAGTTGTCAAGTTGCTCTAAGCATGCTAGAATTTGAAAGATCAGGGAAATCGTTTGAGTTCCTGTTCATGCGTACTCCAATTGTACATTAA 954 0.4497 MSANSLNDVASCSSEMEKFLCELLLDSTQPISERFRALFSLRNLKGPAPRTALILATRDSSNLLAHEAAFALGQMQELEAIPALTSVLNDLSLHPIVRHEAAEALGAIGSDSNVSLLKHSLDSDPAQEVRETCQLALQRILNLKHAAATDDSTAPGISPFKSVDPAAPASSCSSVSQLRDLLLDEEKGMYERYAALFSLRNDGGNEAVAAIVDSLGSKSALLKHEVAYVLGQLQDKAASAALSNILRDVNEHPMVRHEAAEALGSIADDQSVSLLEEFSADPEPLVAQSCQVALSMLEFERSGKSFEFLFMRTPIVH* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2878 317 PANTHER DEOXYHYPUSINE HYDROXYLASE 218 302 - -
Mtr7g2878 317 PANTHER DEOXYHYPUSINE HYDROXYLASE 21 242 - -
Mtr7g2878 317 SUPERFAMILY ARM repeat 3 142 IPR016024 -
Mtr7g2878 317 Gene3D - 161 306 IPR011989 -
Mtr7g2878 317 Hamap Deoxyhypusine hydroxylase [DOHH]. 17 307 IPR027517 GO:0008612|GO:0019135
Mtr7g2878 317 SMART E-Z type HEAT repeats 31 60 IPR004155 -
Mtr7g2878 317 SMART E-Z type HEAT repeats 220 249 IPR004155 -
Mtr7g2878 317 SMART E-Z type HEAT repeats 253 282 IPR004155 -
Mtr7g2878 317 SMART E-Z type HEAT repeats 62 91 IPR004155 -
Mtr7g2878 317 SMART E-Z type HEAT repeats 95 124 IPR004155 -
Mtr7g2878 317 SMART E-Z type HEAT repeats 189 218 IPR004155 -
Mtr7g2878 317 Pfam HEAT repeats 55 137 - -
Mtr7g2878 317 Pfam PBS lyase HEAT-like repeat 255 281 IPR004155 -
Mtr7g2878 317 SUPERFAMILY ARM repeat 95 296 IPR016024 -
Mtr7g2878 317 Gene3D - 8 156 IPR011989 -
Mtr7g2878 317 PANTHER PBS LYASE HEAT-LIKE PROTEIN 21 242 - -
Mtr7g2878 317 PANTHER PBS LYASE HEAT-LIKE PROTEIN 218 302 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2878 K06072 - gmx:100815364 509.99