Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2844 ATGGTACGAATGAAGATCCTGTTGGTGGTTAACCTTGTCGAGTATGTGGAACATGGCGGTGATACAATTTCTGGAAATTTTGTTGTCATGGACCATGATATATTTTGGAGCTCAGATCATCCTGGAATTGATTTCACGGTTACATCTCCCGGAGGAAATGTGGTACACTCTTTGAAAGGAACGTCAGGGGACAAGTTTGAGTTAAAAGCCATACATGGTGGAATTTACAAGTTTTGCTTTCACAATCCTATCTCTACGCCAGAAACTGTGTCCTTCTATGTTCATGTTGGCCACATTCCAAATGTGCATAACTTAGCTAAAGATGAGCATTTTGATCCAATTAATGTGAAGATTGCTGAGTTAAGAGAAGCATTGGAATCTATTATTACAGAACAAAAGTACTTGAAAGCACGTGATACTAGACATCGAAATACAAACGAGAGCACCAGAAAACGTGTTATCTTTTACACACTCTTGGAGTATATTTTATTTGTGGGTACAAGCTTATTGCAAGTCGTATACATTCGTCGTCTCTTCAGCAAATCATTTGCTTACAACCGAGTGTAG 567 0.388 MVRMKILLVVNLVEYVEHGGDTISGNFVVMDHDIFWSSDHPGIDFTVTSPGGNVVHSLKGTSGDKFELKAIHGGIYKFCFHNPISTPETVSFYVHVGHIPNVHNLAKDEHFDPINVKIAELREALESIITEQKYLKARDTRHRNTNESTRKRVIFYTLLEYILFVGTSLLQVVYIRRLFSKSFAYNRV* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2844 188 Pfam emp24/gp25L/p24 family/GOLD 13 179 IPR009038 -
Mtr7g2844 188 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 29 105 IPR036598 -
Mtr7g2844 188 PANTHER EMP24/GP25L/P24 FAMILY/GOLD PROTEIN 12 184 - -
Mtr7g2844 188 ProSiteProfiles GOLD domain profile. 9 96 IPR009038 -
Mtr7g2844 188 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 12 184 IPR015720 -
Mtr7g2844 188 SMART EMP24_GP25L_2 3 180 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2844 Mtr-Chr7 45189492 45194504 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2844 K20347 - gmx:100789501 313.153