Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2827 ATGTCGTCGTCACTGATATCGGATTTCCTCCATCGAGCCGGCGGAACCGCCATCATCGACGGTGGTTTAGCGACTGAGCTTGAACGCCATGGCGCCGACCTCAATGATCCCCTTTGGAGCGCCAAATGCCTCATTTCGATCCCTCAGTCTCACCTCATTCGTCAGGTGCACCTTGATTACTTGGAAAATGGTGCAGACATTATAACCACAGCTTCTTATCAAGCCACCATTCAAGGTTTTAAGGAAAAAGGATTTTCTAATGAAGAAAGTGAAAACATGCTCAGAAGAAGTGTTGAAATTGCTTGCGAGGCTCGCGATTTGTATTATGAACGATGTGCTGCGTGTTCTTCGGGTAAGAATGCTGATGATAGAATCCTCAAGCAACGTCCTATCTTGATTGCAGCGTCAGTTGGGAGTTATGGAGCTTATTTGGCTGATGGATCAGAGTACAGTGGGAATTATGGTGATGCTATCACGTTGAAAACTCTCAAAGATTTTCATCGGAGAAGAGTTCAAGTTTTGGCAGATGCAAGTGCCGACCTGCTTGCATTTGAAACAATTCCAAATAAGATTGAAGCTCAGGCTTTTGCAGAACTTCTGGAAGAAGAGAACATAAAGGTTCCAGCATGGTTTTGTTTTAACTCTAAGGATGGAATTAATGTTGTTAGTGGTGATTCTATAGTGGAATGTGGCTCCATTGCTGAATCATGTAACAAAGTCATTGCTGTCGGAATCAACTGTACCCCACCTAGATTTATACATGGTCTTATACTTTTGCTTAAGAAGGTGACTACAAAACCAATTGCTATATATCCAAACAGCGGGGAAACTTATGACGGTGAACGAAAAGAGTGGATGCAAAATACAGGTGTTACAGATAAAGATTTTGTCTCATATGTTAGTAAATGGTGTGAGCTAGGGGCTTGCCTTGTAGGTGGATGCTGTAGAACGACTCCTGTTACCGTTAGAGGGATATACAACACACTATACAGCAATCAATCTGCTATTCTTTCCACACAGTGA 1023 0.4272 MSSSLISDFLHRAGGTAIIDGGLATELERHGADLNDPLWSAKCLISIPQSHLIRQVHLDYLENGADIITTASYQATIQGFKEKGFSNEESENMLRRSVEIACEARDLYYERCAACSSGKNADDRILKQRPILIAASVGSYGAYLADGSEYSGNYGDAITLKTLKDFHRRRVQVLADASADLLAFETIPNKIEAQAFAELLEEENIKVPAWFCFNSKDGINVVSGDSIVECGSIAESCNKVIAVGINCTPPRFIHGLILLLKKVTTKPIAIYPNSGETYDGERKEWMQNTGVTDKDFVSYVSKWCELGACLVGGCCRTTPVTVRGIYNTLYSNQSAILSTQ* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2827 340 Pfam Homocysteine S-methyltransferase 18 327 IPR003726 -
Mtr7g2827 340 Gene3D - 7 327 IPR036589 -
Mtr7g2827 340 ProSiteProfiles Homocysteine-binding domain profile. 5 329 IPR003726 -
Mtr7g2827 340 SUPERFAMILY Homocysteine S-methyltransferase 13 330 IPR036589 -
Mtr7g2827 340 PIRSF BHMT 6 254 IPR017226 GO:0008168|GO:0008270|GO:0009086
Mtr7g2827 340 PIRSF BHMT 279 339 IPR017226 GO:0008168|GO:0008270|GO:0009086
Mtr7g2827 340 PANTHER ZGC:172121 2 335 - -
Mtr7g2827 340 PANTHER HOMOCYSTEINE S-METHYLTRANSFERASE 2 2 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2827 Mtr-Chr7 44988741 44994867 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2827 K00547 - gmx:100790567 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2827 7 44988741 44994867 Mtr7g2827 7 44988741 44994867 ECH