Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2806 ATGGTGATGAGTGTTCAATTTCAACTATCATCGTCACCATCATCATCACGCTTATGGCTTCCAAATTCTCCATCTCCACCAATTTCAATTTCTCCACAATTTATTCCCACCCGCTGTAGCAGGTTCTCCACTTCACCTCTCGCTGCTACACCAACCCTCCAATCTCAGTATCCCACCATTCAGATAATTGGCAACAACACATTTGATGGTTCCGAAGGAGGGACCGGGACCGATCTTTGGACTGGTCTTGACACTGATCTTTATCACTGGACAAAGGTTTTACGACCTGTGCAGTGGTTTCCTGGGCATATTGCAAAAGCAGAAAAGGAACTGAAGGAACAGCTTAAGTTGATGGATGTTGTTATAGAGGTACGAGACGGGCGAATTCCGTTGTCCACAAGCCATCCACAGATGGATCTATGGCTTGGTAATAAAAAGAGAATTTTGGTTTTAAATAGAGAAGACATGATATCAACTGCAGATCGAAATGCTTGGGCAGAGTATTTTACTAGGCATGGAACAAAGGTTGTCTTCTCCAATGGGCAGCTTGGAATGGGCACATTGAAGCTATGCCGGTTAGCAAAGGAATTAGCAGCTGATGTAAATGTTAAACGGAGAGCCAAAGGTCTACTTCCTCGTCCGGTTCGAGCTGGAATAGTTGGATACCCTAATGTGGGAAAATCATCTCTGATCAACCGTTTGTTAAAGAGAAGAATGTGCCCAGCAGCTCCAAGGCCAGGAGTTACAAGAGACTTGAGGTGGGTTCGATTTGGGAAAGATCTTGAGTTGCTGGATTCTCCTGGGATACTTCCAATGCGAATCAGTGACCAGTCAGCAGCTATAAAACTTGCCATATGTGATGACATTGGAGAGAGGTCTTATGATGTGGCTGATGTTGCTGCAATTCTTGTTCAGATGCTTACAAAGCTTCCAGCAGTAGGTCGAGATGCCCTTTGTAAACGATACAAGTTTCGTGTAGACAGTGAATGTGGTAAAATATTCATAGAGAAACTTGCGCTTCATTTGTTCAATGGAGATGTTCATCAAGCAGCATACCGTGTCTTGTCAGATTTTAGAAAAGGTAGGTTTGGTTGGACTTCATTGGAGAGGCCTCCTAGGTGA 1122 0.4403 MVMSVQFQLSSSPSSSRLWLPNSPSPPISISPQFIPTRCSRFSTSPLAATPTLQSQYPTIQIIGNNTFDGSEGGTGTDLWTGLDTDLYHWTKVLRPVQWFPGHIAKAEKELKEQLKLMDVVIEVRDGRIPLSTSHPQMDLWLGNKKRILVLNREDMISTADRNAWAEYFTRHGTKVVFSNGQLGMGTLKLCRLAKELAADVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRDLRWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVAAILVQMLTKLPAVGRDALCKRYKFRVDSECGKIFIEKLALHLFNGDVHQAAYRVLSDFRKGRFGWTSLERPPR* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2806 373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 286 IPR027417 -
Mtr7g2806 373 CDD YlqF 99 270 - -
Mtr7g2806 373 Gene3D - 97 270 IPR027417 -
Mtr7g2806 373 Gene3D - 275 363 IPR023179 -
Mtr7g2806 373 Pfam 50S ribosome-binding GTPase 217 287 IPR006073 GO:0005525
Mtr7g2806 373 PRINTS GTP1/OBG GTP-binding protein family signature 217 237 IPR006073 GO:0005525
Mtr7g2806 373 PRINTS GTP1/OBG GTP-binding protein family signature 263 278 IPR006073 GO:0005525
Mtr7g2806 373 PANTHER DAR GTPASE 3, CHLOROPLASTIC 74 373 - -
Mtr7g2806 373 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 74 373 - -
Mtr7g2806 373 TIGRFAM GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 97 369 IPR019991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2806 Mtr-Chr7 44757498 44763041 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2806 K19828 - gmx:100784201 559.681