Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2786 ATGGCTAATCTCTTGCCATCATTTTCATTCTCACTTATTCCACTTAATCACCACAAGTATGAAACCAAATCTTCATTTATCCAAATTAAGCATCACAACCAATTTCTTAGTAAAAAAATTCAAGATCTCATTATACCCTTTTCTCATAATCACACTTCAAAATTATTTGCCACGTCATCAAGATTGTCTATAGAAGAAACTGAGCAGAAACTCATTCCTTTTACACAATCCGTAGATATCAAAACATCATTTTCTTATTTGTTTAGGACAGAAATTGGTGAAGGTTTGGTTAAGGTTTATGTTAAAAAGAAAAAAGATTGTTTTTTTGTTTATATTGAGGTTTCTTCTTTAGAGTTAAGTAATGTTAAAGGTGAAACATTGGTGTTGTGTTGGGGTTTATATAGGGATGATTCATCAAGTGTGGATGATGGAAAAGGGATGAATGTGAGCCCTTTTGTGGAAAATTCTGTTGGAAAGTTTTCAGTTGAATTGGAATTTGATGTTGAACAAGTTCCTTTGTATTTGTCTTTTTTGTTGAGATTTTCTGGGTTGGAAATTAGAACCCATTTGAAAAGGAATTTCTGTGTGCCTGTTGGTTTTCTTCGGGGTCGCCCGGATCCGTTGGGGATCTCATTTTCCCGTGATGGGTCGATCAATTTCGCTGTTTTTTCAAGGCATGCTGAGAGTGTGGTATTGTGTTTGTATGATGATGATGATGATAGTGGTCTGGAGAATCCTGCTTTGGAGATTGATCTTGATCCTTATGTCAATAGGTCAGGTGATATTTGGCATATCACTTTTGAGAGTGCGAGGAATTTTGTGAGCTATGGCTATCGTTTCAGAGGAGCTAACCGGAATAACAGTTATGCTGAAGGTGTTGTTTTGGATCCTTATGCTAGAATTGTTGGGAATTCTTTTCAGAATGGTATTGGTTCAGCGAAGAACCTTGGATTTTTGAGAAAGGAACCTGCTTTTGATTGGAGTGATGATTATCATCCGAATTTGGAAATGGAGAAACTAGTGGTGTATAGGTTGAATGTAAAGCGTTTTACCGAGCATGAATCTAGTCAACTTTCCAGTGATTTAGCTGGGAAATTTTCTGGTTTGGCTAAAAAATTGCAGCATTTTAAAGATCTGGGGGTCAATGCTGTTTTGTTGGAGCCAGTTTTCACATTTGATGAGAAAAAGGGACCTTATTTTCCTTGTCATTTTTTCTCTCCAATGAACCTTTACGGACCATCTGGTGATCCTGTATCTACTGTAAACTCTATGAAAGAGATGGTGAAAACTATGCATGCCAATGGGATAGAAGTTATAATGGAAGTTGTTTTCACCAATACTGCTGAGACTGGTGCTCTTCAAGGTATTGATGATTTGTCTTATTATTATGCAAATGGGATTGGTGGTTTGAAAGTACACAGTGCTTTGAATTGTAACTATCCTATAATGCAAAATTTGATTTTGGATAGCCTTAGGCATTGGGTAACTGAGTTTCACATTGATGGTTTCTCTTTTGTAAATGCTTCACATTTGTTGAGAGGGTTTCATGGCGAATACTTGTCTCGGCCTCCCTTGGTCGAAGCAATTTCTTTTGATCCAGTACTGTGGAAAACTAAAATCATTGCAGATTGCTGGGATCCTAATGACATGGAACCAAAGGAGACTCGCTTTCCTCATTGGATGAGATGGGCTGAAATAAATACAAACTTCCGCAACGATGTGAGGAACTTTCTAAGAGGTGAAAGTCTTCTTAGCAACCTTGCAACAAGACTTTGTGGCAGCGGGGACCTGTATTCTGACGGAAGAGGCCCATCATTCTCTTTTAATTACATTGCCGGGAATTTCGGACTTTCTCTTGTGGACTTGGTCAGCTTCAGCAGTGCTGACCTAGAGGCGGAGTTGAGTTGGAATTGTGGAGAAGAAGGACCTACTAATAACACTGCTGTTCTTGAAAGACGACTCAAACAAATCCGTAATTTCCTATTCATCTTATTTGTGTCATTAGGAGTACCTATTTTGAACATGGGAGACGAGTGTGGTCACTCTTCTGGTGGTTCTTCTGCATATGGCGATACAAAACCCTTCAACTGGGCTTCTTTGAAAACAGGTTTTGGTAAGCAAACTACACAATTCATTTCCTTTTTGACTTCCTTGAGAACGAGGCGGAGTGATCTTCTTCAGAGTAGGAATTTCTTAAAAGAAGAAAACATTGAATGGCGAGGAATCGACAAGGCTCCGCCAAGATGGGAAGATCCATCCTGCAAGTTCCTGGCCATGACTTTGAAGACTGAACAAAATGAGCTTCAAGAGAGCTCTGTATCTTCTGATATATTAGGAGATTTATTTATTGCTTTCAATGCAGATGATCATCCAGAGACTGTAGTTTTACCCTTGCTTCCAGAAGGGATGTCATGGTACCGCTTAGTCGACACTGCACTTCCATTTCCAGGGTTTTTCTTGACCAATGGTGATTTTGTCCCGCCTGAGCAAACATCAGGTTTGTCTACTTATGGAATGAAGTCTTACAGCTGCACTTTGTTTGAGGCAAACAAAAAAGAAACGCAAGAATTACACTTGCAAAAGGAACAAAAATAA 2595 0.3881 MANLLPSFSFSLIPLNHHKYETKSSFIQIKHHNQFLSKKIQDLIIPFSHNHTSKLFATSSRLSIEETEQKLIPFTQSVDIKTSFSYLFRTEIGEGLVKVYVKKKKDCFFVYIEVSSLELSNVKGETLVLCWGLYRDDSSSVDDGKGMNVSPFVENSVGKFSVELEFDVEQVPLYLSFLLRFSGLEIRTHLKRNFCVPVGFLRGRPDPLGISFSRDGSINFAVFSRHAESVVLCLYDDDDDSGLENPALEIDLDPYVNRSGDIWHITFESARNFVSYGYRFRGANRNNSYAEGVVLDPYARIVGNSFQNGIGSAKNLGFLRKEPAFDWSDDYHPNLEMEKLVVYRLNVKRFTEHESSQLSSDLAGKFSGLAKKLQHFKDLGVNAVLLEPVFTFDEKKGPYFPCHFFSPMNLYGPSGDPVSTVNSMKEMVKTMHANGIEVIMEVVFTNTAETGALQGIDDLSYYYANGIGGLKVHSALNCNYPIMQNLILDSLRHWVTEFHIDGFSFVNASHLLRGFHGEYLSRPPLVEAISFDPVLWKTKIIADCWDPNDMEPKETRFPHWMRWAEINTNFRNDVRNFLRGESLLSNLATRLCGSGDLYSDGRGPSFSFNYIAGNFGLSLVDLVSFSSADLEAELSWNCGEEGPTNNTAVLERRLKQIRNFLFILFVSLGVPILNMGDECGHSSGGSSAYGDTKPFNWASLKTGFGKQTTQFISFLTSLRTRRSDLLQSRNFLKEENIEWRGIDKAPPRWEDPSCKFLAMTLKTEQNELQESSVSSDILGDLFIAFNADDHPETVVLPLLPEGMSWYRLVDTALPFPGFFLTNGDFVPPEQTSGLSTYGMKSYSCTLFEANKKETQELHLQKEQK* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2786 864 PANTHER GLYCOGEN DEBRANCHING ENZYME 61 852 - -
Mtr7g2786 864 CDD AmyAc_plant_IsoA 338 727 IPR044096 GO:0019156|GO:0019252
Mtr7g2786 864 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 207 299 IPR004193 GO:0004553|GO:0005975
Mtr7g2786 864 Gene3D Immunoglobulins 195 316 IPR013783 -
Mtr7g2786 864 PANTHER ISOAMYLASE 2, CHLOROPLASTIC 61 852 - -
Mtr7g2786 864 Gene3D Glycosidases 321 734 - -
Mtr7g2786 864 SMART aamy 344 719 IPR006047 GO:0005975
Mtr7g2786 864 Gene3D - 735 860 IPR013780 -
Mtr7g2786 864 SUPERFAMILY Glycosyl hydrolase domain 734 849 - -
Mtr7g2786 864 SUPERFAMILY (Trans)glycosidases 323 724 IPR017853 -
Mtr7g2786 864 SUPERFAMILY E set domains 203 333 IPR014756 -
Mtr7g2786 864 Pfam Alpha amylase, catalytic domain 364 450 IPR006047 GO:0005975
Mtr7g2786 864 CDD E_set_GDE_Isoamylase_N 207 344 IPR044505 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2786 Mtr-Chr7 44521756 44524834 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2786 59 849 Glycoside Hydrolase AT1G03310 56.495 0.0 889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2786 K01214 - gmx:100777953 1247.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2786 7 44521756 44524834 Mtr7g2786 7 44521756 44524834 ECH