Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr7g2780 | ATGCTGTTCTTCTCGTACTTCAAAGATTTGGTGGGAAGAGAAGTGACGGTTGAACTCAAGAACGATTTAGCCATCAGAGGAACCTTGCATTCTGTTGACCAATACCTCAACATCAAGCTTGAAAACACTCGCGTTGTTGATCAAGACAGATACCCTCACATGCTTTCTGTAAGGAACTGCTTCATCAGAGGATCAGTGGTGAGATACGTACAATTGCCTCCAGAAGGTGTGGACATTGAACTGTTGCATGATGCCACAAGGAGAGAAGCCCGGGGTGGTTGA | 282 | 0.4574 | MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDRYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG* | 94 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr7g2780 | 93 | SUPERFAMILY | Sm-like ribonucleoproteins | 3 | 92 | IPR010920 | - | |
| Mtr7g2780 | 93 | CDD | LSm2 | 2 | 90 | IPR016654 | GO:0006397 | |
| Mtr7g2780 | 93 | PANTHER | SNRNP CORE PROTEIN FAMILY MEMBER | 1 | 91 | IPR016654 | GO:0006397 | |
| Mtr7g2780 | 93 | Pfam | LSM domain | 7 | 71 | IPR001163 | - | |
| Mtr7g2780 | 93 | SMART | Sm3 | 5 | 72 | IPR001163 | - | |
| Mtr7g2780 | 93 | Gene3D | - | 1 | 92 | - | - | |
| Mtr7g2780 | 93 | PIRSF | Lsm2 | 1 | 93 | IPR016654 | GO:0006397 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr7g2780 | Mtr-Chr7 | 44482333 | 44487555 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr7g2780 | K12621 | - | qsu:112008381 | 188.348 |
Event-related genes