Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2752 ATGAAAAACTTGCTTTCTCTCGTTCACCACTCTCTACGACACAAATCACCATACCATCTCGAACACATTAAACCATTCTCATTCACAACCAATAAACCAAAATGGAACTCACCAACAAACGTAATTATCACAAACCCAACCCTCTTGATAATGGAATCATGTTCCACAATGCGTCAACTCAAACAAATTCAAGCACGCATGACTCTCACCGGCATCATCACCCACGCGTTTCCCGTCAGCAGAGTAATCGCGTTCTGTGCACTTGCCCATTCCGGTGACCTTCATTACGCACACACAATTTTCAATCGCGTTGAACAACCCAACACGTTCATGTGGAACACTATGATAAGGGGATATCAAAATGCTCGAAAACCCATTTTTGCATTCTCTTTCTTTGTCTATATGTTTCAATTACGCGTTGAAATGGATTCTAGAAGCTTTGTTTTCGCGCTGAAGGCTTGTCAGCAGTTTGAGACGGTTTTTGAGGGAGAATCCGTGTATTGTGTTGTTTGGAAAATGGGATTTGATTGTGAGTTGCTTGTGAGGAATGGGTTGATTCATTTTTATGCTGAACGTGGGTTGTTGAAAAATGCGCGTCAAGTGTTTGATGAAAGTTCTGATAAGGATGTTGTTACTTGGACTACTATGATTGATGGGTATGCGGCACATGACTGTTCCGAGGAGGCTATGGAGGTTTTTGAATTGATGTTGTTAAGTCATGTTGAGCCGAATGAGGTGACTTTGATTGCGGTGGTTTCAGCTTGTTCTGACATGGGTAACCTTGAAATGGGGAAGAGAGTTCATGAAAAAGTGGAAGAGAAGAATATGAGGTGTAGTTTGAGTTTGCATAACGCGTTGTTGGATATGTATGTGAAATGTGATTGTTTGGTTGATGCTAGAGAGCTTTTTGATAGAATGGCAACCAAGGATGTTTACTCGTGGACTAGTATGGTTAATGGGTATGCTAAATGTGGTGACTTGGAATCTGCTAGGAGGTTTTTTGATCAAACTCCTCGGAAAAATGCGGTCTGTTGGAGTGCAATGATTGCAGGATATTCTCAGAATAACAAACCTAAGGAATCATTGAAATTGTTTCATGAAATGATGGAGCGAGGTGTGGTTCCGATTGAGCATACCTTAGTGAGTGTACTCTCTGCTTGTGGCCAGCTAACTTGCTTGAACTTGGGCGATTGGATTCACCAATATTTTGTTGTTGGGAAAATAATTCCCCTTAGTGTTACTCTTGAAAATGCGATTGTAGATATGTATGCCAAATGTGGAAGCATAGATGCAGCAACAGAAGTTTTCAGTACAATGCCAGAGAGAAATCTAATTTCTTGGAATACTATGATTGCAGGGTATGCGGCTAATGGTAGAGCAAAGCAAGCCATCAATGTATTTGATCAGATGAGAAATATGGGATTTGAGCCAAACAATATCACATTTGTGAGTTTGTTGACAGCTTGCAGCCACGGTGGTTTGATTTCCGAAGGTCGAGAATATTTTGACAACATGGAGAGAAAGTATGGGATAAAACCCGAAAGGGGACATTATGCATGCATGGTTGATCTATTAGGTCGAACTGGACTCCTCGAAGAAGCTTACAAGTTAATAGCAAACATGCCAATGCAGCCTTGTGAGGCTGCTTGGGGTGCCCTTCTAAATGCTTGTAGAATGCATGGCAATGTTGAGCTTGCCAGATTGTCGGCACATAATCTTCTAAGATTGGACCCAGAAGACAGTGGAATATATGTGCTGCTGGCAAATACTTGTGCTAATGATAGAAAATGGAGTGATGTAAGGAGGGTGAGAAGTTTGATGAAAGACAAGGGTGTGAAGAAGATTCCTGGTTATAGCTTAATAGAGATAGATGGCGGGTTTGTAGAATTTTTGGTGGCCGATGAATCACACCCTCAATCTGAGGAGATCTATAAAGTACTAGAGGAAATACTTTTGTTGTCAAAATTGGAAGACTATAGTTATGACTTGTAA 1992 0.4101 MKNLLSLVHHSLRHKSPYHLEHIKPFSFTTNKPKWNSPTNVIITNPTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSEEIYKVLEEILLLSKLEDYSYDL* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2752 663 Gene3D Tetratricopeptide repeat domain 417 624 IPR011990 GO:0005515
Mtr7g2752 663 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 209 243 IPR002885 -
Mtr7g2752 663 Pfam PPR repeat 518 541 IPR002885 -
Mtr7g2752 663 Pfam PPR repeat 110 136 IPR002885 -
Mtr7g2752 663 Pfam PPR repeat 312 336 IPR002885 -
Mtr7g2752 663 Pfam PPR repeat 283 309 IPR002885 -
Mtr7g2752 663 Pfam E motif 560 622 IPR046848 -
Mtr7g2752 663 Gene3D Tetratricopeptide repeat domain 270 394 IPR011990 GO:0005515
Mtr7g2752 663 Gene3D Tetratricopeptide repeat domain 174 269 IPR011990 GO:0005515
Mtr7g2752 663 Gene3D Tetratricopeptide repeat domain 51 173 IPR011990 GO:0005515
Mtr7g2752 663 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 443 477 IPR002885 -
Mtr7g2752 663 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 310 340 IPR002885 -
Mtr7g2752 663 Pfam PPR repeat family 208 255 IPR002885 -
Mtr7g2752 663 Pfam PPR repeat family 340 387 IPR002885 -
Mtr7g2752 663 Pfam PPR repeat family 443 490 IPR002885 -
Mtr7g2752 663 PANTHER - 89 259 - -
Mtr7g2752 663 PANTHER - 198 322 - -
Mtr7g2752 663 PANTHER - 319 650 - -
Mtr7g2752 663 Pfam E+ motif 629 651 IPR046849 -
Mtr7g2752 663 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 341 375 IPR002885 -
Mtr7g2752 663 TIGRFAM PPR: pentatricopeptide repeat domain 312 336 IPR002885 -
Mtr7g2752 663 TIGRFAM PPR: pentatricopeptide repeat domain 283 310 IPR002885 -
Mtr7g2752 663 TIGRFAM PPR: pentatricopeptide repeat domain 211 245 IPR002885 -
Mtr7g2752 663 TIGRFAM PPR: pentatricopeptide repeat domain 480 513 IPR002885 -
Mtr7g2752 663 TIGRFAM PPR: pentatricopeptide repeat domain 343 375 IPR002885 -
Mtr7g2752 663 TIGRFAM PPR: pentatricopeptide repeat domain 445 478 IPR002885 -
Mtr7g2752 663 SUPERFAMILY TPR-like 179 335 IPR011990 GO:0005515
Mtr7g2752 663 PANTHER - 319 650 - -
Mtr7g2752 663 PANTHER - 198 322 - -
Mtr7g2752 663 PANTHER - 89 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2752 Mtr-Chr7 44219913 44227158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2752 97 651 Glycoside Hydrolase AT3G49170 32.321 1.23e-96 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2752 - - mtr:MTR_7g093900 1215.68