Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2680 ATGGCACCAAGATGGAAAGGAAAAGATGCAAAATCGAAAAAGGAAGCAGAAGCTGAGGCACTTAAAGAACCCATGTCAAAGATTATATCACAACTTCAGTCTTCTTTAGTTCAATCAAATACTTGTGGTTTTCTCTCTGATAACTGTGTACACTTAACAGTGCAAGCAGAACAACTTGACTTGCTTGATAAAGCATGCTTTGGTCGACCTGTGAGGATAGTTGAAAAGGATATGTATTGGTTTCAATTAACCGTGGAGGAAGCATTCTATCTATGTTATTCCTTGAAATGCCTCAAGATTAAGATTAATGTTGGTGCTGATACCGGTCCCTTAAATGATGAAGAGTTGTGGCATTACTTCAGGTCCAAGAAAGAAACATTCCCTTATTTCTACAAGGCTTATTCTCATCTTAGAATGAAAAATTGGGTTGTGAGGTCAGGGGCTCAGTATGGTGTAGACTTGATTGTCTATCGCCATCATCCTGCTCGGGTGCATTCTGAGTATGGTGTACTTGTTCTATCTCATGACAAGGATGGTGATCTAAATGGAAGATTGAGAGTATGGTCTGATGTTCATTGCACAACTCGACTTCTTGGAGGTGTTGCAAAAACCTTATTAGTTTTGTACGTTAACAAAAATGGTAACAATGATGAGTCTCTGTTATGTTTGACAAACTATACCGTTGAAGAACGCACAATCTCCCGATGGAGTCCAGAACAATGCCGTGAAAGATCCATATAG 741 0.3927 MAPRWKGKDAKSKKEAEAEALKEPMSKIISQLQSSLVQSNTCGFLSDNCVHLTVQAEQLDLLDKACFGRPVRIVEKDMYWFQLTVEEAFYLCYSLKCLKIKINVGADTGPLNDEELWHYFRSKKETFPYFYKAYSHLRMKNWVVRSGAQYGVDLIVYRHHPARVHSEYGVLVLSHDKDGDLNGRLRVWSDVHCTTRLLGGVAKTLLVLYVNKNGNNDESLLCLTNYTVEERTISRWSPEQCRERSI* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2680 246 Gene3D - 126 225 IPR011856 GO:0003676
Mtr7g2680 246 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2-1-LIKE 1 245 - -
Mtr7g2680 246 Pfam tRNA intron endonuclease, catalytic C-terminal domain 131 215 IPR006677 GO:0000213|GO:0006388
Mtr7g2680 246 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 1 245 IPR006676 GO:0000213|GO:0006388
Mtr7g2680 246 PIRSF tRNA_endo_SEN2 3 244 IPR016589 GO:0000213|GO:0000214|GO:0006388
Mtr7g2680 246 Pfam tRNA intron endonuclease, N-terminal domain 43 103 IPR006678 GO:0000213|GO:0006388
Mtr7g2680 246 SUPERFAMILY tRNA-intron endonuclease catalytic domain-like 126 215 IPR036167 GO:0006388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2680 K15322 - gmx:100810335 376.711