Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2660 ATGGTCGATCCTCAACATCAACTCCAACTTCCCCACAGCTTCAACCAACAACCTTTATACAGAAACTTATGCAACACGCTTCTCTCTTTAACATTTTCTCGCTCCCTCCCCAAAGGTCTTCAACTCCACGCTCATATCATCAAATTAGGGTTACAAACTATTCCTCTTCTTTCTCATCACCTCATCAACTTCTACTCCAAAACCCATCTCCCTTATTCCTCCCTTCAAATCTTCCACGATTCTCCTCACAAATCCGCCACTACTTGGAGCTCTGTCATTTCTTCCTTCGCTCAAAATGACCTCCCTTTACTCTCTCTTAACTACTTCCGCCTTATGCTTCGTCAAGGTGTTCCTCCCGATGACCACATTTTCCCTAGTGCTACTAAATCATGCGGGATTCTATCGTCGCTCCCCGTTGCTAAAATGCTGCATTGTTTTGCTTTAAAGACGGCTTACCATCTTGATATTTTTGTGGGGAGTTCTGTTATTGATATGTATGCTAAATGTGGTGATATTTGTTACGCGCATAACGTGTTTGATGAAATGCCGTATAGAAATGTTGTTTCTTGGAGTGGGTTGATTTATGGGTATGTTCAATTGGGTGAGGATGATGAATCGTTGAGGCTTTTTAAACGGTTTCTTGTTGAAGAAGAAAATGAGGGTGTTAATGATTTTACTTTGTCCAGTGTTTTAAGGGTTTGTGGCGGTTCGACTTTGCTTCAAATGGGGAGGTTAATACATGGGTTGAGTTTTAAGACGAGTTTTGATTCGTCTTGTTTTGTTGCAAGTTCTTTGATTTCGTTGTATTCGAAATGTGGGGTTGTTGAAGAAGCTTATGATGTTTTTGAGGAGGTTACTGTTAGGAATCTTGGTATGTGGAATGCGATGTTGATTGCTTGTGCTCAGCATGCACATACGGATAAAACATTTGAGTTGTTTGATAAGATGAAGAGTGTTGGTGGTATGAAGGCTAATTTTATTACCTTTTTGTGTGTGCTTTATGCTTGCAGCCATGCGGGGTTGGTAGAGAAGGGTAAGTATTACTTTGAGTTGATGAAGGATTATGGTATTGAACCTGGGACACAACATTATTCAACCATGGTGGATTTGCTTGGTCGTGCGGGGAAGTTAAATGATGCGGTTAAATTGATTGAGGAAATGCCTATGGAACCTACTGAATCTGTTTGGGGAGCTTTGTTAACTGGGTGTAGATTACATGGGAATACCAAACTGGCATCTTATGTTGCTGATAGAGTTTCTGAGTTGGGTTCTGTCAGTTCTGGACTTCATGTTATGCTTTCTAATGCTTATGCTGCCGCTGGGAGATGGGAGGAAGCGGCGAAAGCAAGGAAGATGATGAGGGACAGAGGAATAAAGAAGGAAACTGGATTGAGTTGGGTGGAGGAAGGAAATAGAATTCACACATTTGCTGCTGGTGATAGGTCTCATGCGAAGTCCGTAGAAATTTATGATAAGTTAGATGAGTTGGGTGAAGAAATGGATAAAGCTGGTTATGTTGCCGATACTTCTTTTGTGTTAAAAGAAGTGGATGGGGAAGAGAAGAGTAGAAGTATTAGGTATCATAGTGAGAGATTAGCTATTGCATTTGGATTTATTACATTCCCTCATGGACAACCAATTAGAGTAATGAAGAATTTACGGGTTTGTGGCGATTGTCACACTGCTATCAAGTTTATTAGTAAATGTACTGGAAGGGTCATCATCGTGAGGGACAATAATCGGTTCCATCGATTTGAGGATGGAAAATGTACTTGTGGAGATTATTGGTGA 1791 0.4082 MVDPQHQLQLPHSFNQQPLYRNLCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2660 596 TIGRFAM PPR: pentatricopeptide repeat domain 292 320 IPR002885 -
Mtr7g2660 596 TIGRFAM PPR: pentatricopeptide repeat domain 88 120 IPR002885 -
Mtr7g2660 596 TIGRFAM PPR: pentatricopeptide repeat domain 327 360 IPR002885 -
Mtr7g2660 596 TIGRFAM PPR: pentatricopeptide repeat domain 364 387 IPR002885 -
Mtr7g2660 596 PANTHER OS01G0913400 PROTEIN-RELATED 13 539 - -
Mtr7g2660 596 Pfam Pentacotripeptide-repeat region of PRORP 296 388 IPR033443 -
Mtr7g2660 596 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 85 119 IPR002885 -
Mtr7g2660 596 Pfam PPR repeat 88 117 IPR002885 -
Mtr7g2660 596 Pfam PPR repeat 263 287 IPR002885 -
Mtr7g2660 596 Pfam PPR repeat 188 212 IPR002885 -
Mtr7g2660 596 Pfam PPR repeat 160 186 IPR002885 -
Mtr7g2660 596 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 289 323 IPR002885 -
Mtr7g2660 596 PANTHER BNAA10G28390D PROTEIN 13 539 - -
Mtr7g2660 596 Gene3D Tetratricopeptide repeat domain 139 242 IPR011990 GO:0005515
Mtr7g2660 596 Gene3D Tetratricopeptide repeat domain 16 136 IPR011990 GO:0005515
Mtr7g2660 596 Gene3D Tetratricopeptide repeat domain 260 493 IPR011990 GO:0005515
Mtr7g2660 596 Pfam E+ motif 473 500 IPR046849 -
Mtr7g2660 596 Pfam E motif 406 468 IPR046848 -
Mtr7g2660 596 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 325 359 IPR002885 -
Mtr7g2660 596 Pfam DYW family of nucleic acid deaminases 504 596 IPR032867 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2660 Mtr-Chr7 43331600 43333729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2660 35 596 Glycoside Hydrolase AT3G49170 37.587 3.33e-123 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2660 - - lang:109356914 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2660 7 43331600 43333729 Mtr7g2660 7 43331600 43333729 ECH