Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr7g2631 | ATGGCCACCACCACATCACCTTACTGCATCCAACTCAGCGGCGTTACCGAGTCAACTCGTCCTCCAAAATCCACAACCACACGCAAGAAAAGCTCCAACGAAGTTGCATTCAAGGAGAAGAAGGATGGTTTCGTCGACTACGACAGAGGACACCACCAAGTCTCCACCAAAATATCCGGCCTCCGTAAAGAAGATATCCCCGCTCACTACCGCCTCCGTGTTGCCGGTAACCGCTTCCAAAAGGATTGGACCGTGTCGGAGGTCGTCGACTCCGTCCTCTCCCTCACTCTCCGTGACGACATTGAAGGCCTGCTCAATCGTTGGATTGGTCGATTCGCTCGCAAGAATTTCCCTTTCCTCATCAGAGAGTTGACACAACGAGGTTCAATTGAACACTGTAACTTAGTTTTCAGCTGGATGAAGAATCAGAAAAATTATTGTGCCAGAACAGATATATACAACATGATGATTAGGTTGCATGCTAGGCATAATAGAACGGATCAGGCACGTGGTTTGTTTTTTGAGATGCAAAAATGCAGGTGTAAACCTGATGCTGAGACATACAATGCTCTTATTAATGCGCATGGTCGAGCCGGACAATGGCGTTGGGCTATGAATATTATGGATGACATGCTGCGTGCAGCTATCCCACCAAGTCGGTCAACTTACAACAACTTGATTAATGCTTGTGGATCTAGTGGAAATTGGAAAGAAGCACTTAATGTTTGCAAGAAAATGACTGACAATGGAGTTGGACCTGATCTTGTCACTCACAATATTATGTTAACTGCATTTAAAAGTGGCACTCAGTATTCAAAAGCTTTGTCGTACTTTGAACTTATCAAGGGAACTCACATTCGCCCGGACACAACTACACACAATATCATTATCCATTGTCTAGTGAAGCTTAAACAATATGACAAAGCCGTTGATATTTTTAATTCCATGAAGGAAAAGAAGTCGGAATGTCACCCTGACGTTGTAACATTCACCAGTATGATTCATTTGTATTCTGTGTGTGGACACATTGAAAATTGTGAGGCTGCATTCAATATGATGCTTGCAGAAGGGCTGAAACCAAATATAGTCTCATACAATGCACTACTAGGTGCATATGCTGCTCGTGGGATGGAAAATGAGGCACTTCAGGTTTTTAATGAGATAAAACAAAATGGTTTCCGTCCAGATGTTGTATCTTATACATCTCTACTTAATGCTTATGGAAGATCACGAAAGCCCCAAAAAGCAAGGGAAATATTCAAAATGATAAAGAGAAACAACTTGAAGCCAAACATTGTCAGTTACAATGCACTGATTGATGCCTATGGGTCTAATGGTTTGCTTGAAGATGCAATTGAAATCTTGCGAGAAATGGAACAAGATAAGATTCATCCGAATGTTGTCTCAATATGCACACTCTTGGCTGCCTGTGGACGGTGTGGTCAAAAGGTGAAAATTGATACTGTGCTGTCAGCGGCTGAGATGCGAGGCATTAAATTGAACACAGTTGCATATAATTCAGCTATAGGAAGCTATATTAATGTGGGGGAATATGACAAGGCTATAGACTTGTATAACTCTATGAGGAAGAAAAAAATAAAATCTGATTCCGTTACTTACACTGTCTTGATAAGTGGTTGTTGTAAGATGTCAAAATTTGGGGAAGCCCTGTCTTTTATGGAAGAAATGATGCATCTAAAACTTCCTATGTCCAAAGAGGTCTACTCATCTATCATATGTGCCTATAGCAAACAGGGTCAAATCATAGAAGCAGAGTCTACATTCAACTTGATGAAATCATTGGGTTGCAGTCCAGATGTGGTTACATATACTGCAATGCTTGATGCCTACAATGCAGCCGAGAAGTGGGAGAAATTATATGCACTATTTGAAGAAATGGAAGAAAATGACGTCAAGCTAGATACCATCGCATGTGCAGCTCTAATGAGAGCTTTTAACAAAGGTGGCCAACCAGGAAGGGTCCTTAGTCTTGCACAAAGTATGAGAGAAAAAGACATTCCTTTAAGTGATACCATATTTTTTGAAATGGTATCTGCCTGTGGCTTATTACATGATTGGAAGACAGCTGTTGATATGATCAAGTACATGGAGCCCTCACTTCCTGTAATTTCATCTGGGTGTTTAAATCTGTTCCTTAATTCTTTAGGAAAAAGTGGAAAAATTGAGATTATGTTGAAGCTATTCTTCAAAATGTTGGCATCTGGTGCTGAAGTTAACTTCAATACTTATTCTATTTTATTGAAAAACCTTTTATCATCTGGAAATTGGAGGAAGTATTTAGAGGTACTACAATGGATGGAGGATGCAGGAATTCATCCCTCAAATGAAATGTACCGTGATATATCTTTTTCACAAAAAAACTGTGGGGTTGAAAATGCTGCTGTCATAAAAGAAAGACTTGAATCTTTGAAAAGAAATGCCGGGGATCAAAGTTCTGCAAGCCAACCTTGTGAATCTCATGTATGTTCTTAG | 2493 | 0.4035 | MATTTSPYCIQLSGVTESTRPPKSTTTRKKSSNEVAFKEKKDGFVDYDRGHHQVSTKISGLRKEDIPAHYRLRVAGNRFQKDWTVSEVVDSVLSLTLRDDIEGLLNRWIGRFARKNFPFLIRELTQRGSIEHCNLVFSWMKNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQPGRVLSLAQSMREKDIPLSDTIFFEMVSACGLLHDWKTAVDMIKYMEPSLPVISSGCLNLFLNSLGKSGKIEIMLKLFFKMLASGAEVNFNTYSILLKNLLSSGNWRKYLEVLQWMEDAGIHPSNEMYRDISFSQKNCGVENAAVIKERLESLKRNAGDQSSASQPCESHVCS* | 831 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr7g2631 | 830 | TIGRFAM | PPR: pentatricopeptide repeat domain | 292 | 321 | IPR002885 | - | |
| Mtr7g2631 | 830 | TIGRFAM | PPR: pentatricopeptide repeat domain | 503 | 536 | IPR002885 | - | |
| Mtr7g2631 | 830 | TIGRFAM | PPR: pentatricopeptide repeat domain | 608 | 642 | IPR002885 | - | |
| Mtr7g2631 | 830 | TIGRFAM | PPR: pentatricopeptide repeat domain | 152 | 185 | IPR002885 | - | |
| Mtr7g2631 | 830 | TIGRFAM | PPR: pentatricopeptide repeat domain | 187 | 219 | IPR002885 | - | |
| Mtr7g2631 | 830 | TIGRFAM | PPR: pentatricopeptide repeat domain | 574 | 607 | IPR002885 | - | |
| Mtr7g2631 | 830 | TIGRFAM | PPR: pentatricopeptide repeat domain | 398 | 432 | IPR002885 | - | |
| Mtr7g2631 | 830 | TIGRFAM | PPR: pentatricopeptide repeat domain | 433 | 467 | IPR002885 | - | |
| Mtr7g2631 | 830 | TIGRFAM | PPR: pentatricopeptide repeat domain | 328 | 362 | IPR002885 | - | |
| Mtr7g2631 | 830 | TIGRFAM | PPR: pentatricopeptide repeat domain | 222 | 254 | IPR002885 | - | |
| Mtr7g2631 | 830 | TIGRFAM | PPR: pentatricopeptide repeat domain | 363 | 397 | IPR002885 | - | |
| Mtr7g2631 | 830 | TIGRFAM | PPR: pentatricopeptide repeat domain | 538 | 568 | IPR002885 | - | |
| Mtr7g2631 | 830 | Pfam | PPR repeat | 152 | 181 | IPR002885 | - | |
| Mtr7g2631 | 830 | Gene3D | Tetratricopeptide repeat domain | 487 | 572 | IPR011990 | GO:0005515 | |
| Mtr7g2631 | 830 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 361 | 395 | IPR002885 | - | |
| Mtr7g2631 | 830 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 326 | 360 | IPR002885 | - | |
| Mtr7g2631 | 830 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 289 | 323 | IPR002885 | - | |
| Mtr7g2631 | 830 | SUPERFAMILY | TPR-like | 236 | 591 | IPR011990 | GO:0005515 | |
| Mtr7g2631 | 830 | Pfam | PPR repeat family | 288 | 335 | IPR002885 | - | |
| Mtr7g2631 | 830 | Pfam | PPR repeat family | 501 | 549 | IPR002885 | - | |
| Mtr7g2631 | 830 | Pfam | PPR repeat family | 183 | 230 | IPR002885 | - | |
| Mtr7g2631 | 830 | Pfam | PPR repeat family | 574 | 617 | IPR002885 | - | |
| Mtr7g2631 | 830 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 501 | 535 | IPR002885 | - | |
| Mtr7g2631 | 830 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 184 | 218 | IPR002885 | - | |
| Mtr7g2631 | 830 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 536 | 570 | IPR002885 | - | |
| Mtr7g2631 | 830 | PANTHER | RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED | 24 | 789 | - | - | |
| Mtr7g2631 | 830 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 571 | 605 | IPR002885 | - | |
| Mtr7g2631 | 830 | PANTHER | OS07G0213300 PROTEIN | 24 | 789 | - | - | |
| Mtr7g2631 | 830 | SUPERFAMILY | TPR-like | 184 | 354 | IPR011990 | GO:0005515 | |
| Mtr7g2631 | 830 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 396 | 430 | IPR002885 | - | |
| Mtr7g2631 | 830 | Pfam | Pentatricopeptide repeat domain | 447 | 478 | IPR002885 | - | |
| Mtr7g2631 | 830 | Pfam | Pentatricopeptide repeat domain | 734 | 782 | IPR002885 | - | |
| Mtr7g2631 | 830 | Pfam | Pentatricopeptide repeat domain | 384 | 445 | IPR002885 | - | |
| Mtr7g2631 | 830 | Pfam | Pentatricopeptide repeat domain | 629 | 673 | IPR002885 | - | |
| Mtr7g2631 | 830 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 746 | 780 | IPR002885 | - | |
| Mtr7g2631 | 830 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 219 | 253 | IPR002885 | - | |
| Mtr7g2631 | 830 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 149 | 183 | IPR002885 | - | |
| Mtr7g2631 | 830 | Gene3D | Tetratricopeptide repeat domain | 379 | 486 | IPR011990 | GO:0005515 | |
| Mtr7g2631 | 830 | Gene3D | Tetratricopeptide repeat domain | 573 | 690 | IPR011990 | GO:0005515 | |
| Mtr7g2631 | 830 | Gene3D | Tetratricopeptide repeat domain | 266 | 378 | IPR011990 | GO:0005515 | |
| Mtr7g2631 | 830 | Gene3D | Tetratricopeptide repeat domain | 95 | 232 | IPR011990 | GO:0005515 | |
| Mtr7g2631 | 830 | Gene3D | Tetratricopeptide repeat domain | 712 | 803 | IPR011990 | GO:0005515 | |
| Mtr7g2631 | 830 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 606 | 640 | IPR002885 | - | |
| Mtr7g2631 | 830 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 431 | 465 | IPR002885 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr7g2631 | 302 | 788 | Glycosyltransferase | AT1G05670 | 21.837 | 3.89e-30 | 125 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr7g2631 | - | - | gmx:100814643 | 1421.37 |