Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2611 ATGTCACCGGCGCCGATGCACTTCCCTTCTCCGATCAACTCCGATGACACAACTCCACATTCTCCTCTCCCCTTCGCTCCTTTCAACGCCGACGCCGTCAACCCTCCGGCCGCTGCAACCGCACGTGTAAGGTCGAAGCCGAGACTTGTCAAACTGAGGAAGCAATCGGCGTCACAAACCGCAAGGTCTAGGACCAGAACCGCCGCCACCGCAGTTGAAAATGAAGGTTCTGGTTCCGGTTTCAATCCTTTTCGCTCCGATCAGGTAAGTGAGGGTTTTGTGTTTAGTGCTAGAAAAGTTGATTCTGATTCTGTTAGGGATTTGAATTCGGAACAGAAAGAAAGTGCCGGTGTAGAATTTGTGTTTAGTGCTAAAACGAATTCGGTTTCTGGTGATGAAAGTAAGAAATTAAATTCGGAAGAGGAGAAAGGGAAAGTTAATTTTACAGAGTTTGTTTTCGGCGCTGTGAGAAATGATTTGCATTCTAGTTTTAATGTAGAAAAAGAAAAATCTAGTGTACCTATGTGGAATTCAGGGTTTGCTGATTATGGGGAGAGGGAATGTGTAAATGAATTTGTGTTTGGAAAGCAAGAATCTGTTGATAGGATGAGAAATTCGGGTAATGGACCTGGTGTTTTTCATGCTGAGACAGAAACAAATGGTGATTTTGATAAAGGTGGTGATAAGTGTGGTGATTTAGGCGATGATGTTAAGTCGAAGAGTGGAAATGGAAGTGCTAATGGTTTTTCTACTATTTTTACTGACTTTTCTGATAGTAAATTAGTAGATGAGATAAATAAACTGAACATCAATGATCACGAGGGTGTTCGTATTGCTAGAGATTCTACGAGTTCACATGTAAGTAGTAGCAACGTTTTTGTGTTTGGAGGAAGTCACAAGGTTTCTAGTGTTAGTTCGGGAACTAATACTGGCGGTGAACAGTTGTATACCAATGATGATTCTGACAGTGACAAAGCTTCCGGAACACATGGTGTCCAAAATGGAACTGCTCAAGGTATTGATCAGGATGCTACAGGAATACCTTGTTCTAAGACAACCACCAGTCAGGATGGGATCAGAGATTTTCACGTGTCTGAAGATGCTCAAGTGAATGGAGTTGAAGAGTCTTGTACGGGCTTTAAGCCTCCGGCATGGGATCCTTCTTATTTTAAAGACAACTTATTTTGTAAGTTGAATAAAAAATTTGAACCCACACATAAGAGTAAATCTTCCAAAGAAAAAGGATCAAAATATATGAGACGAAAATTGAAGTCACATTCATTGAATAAGAAACAGACAAGGCTAGATCATTTGCCAAAAGAAAACAGTTCGCTTGAAACCCCTGAATCTTCTGGTGGCTTTTCTCCGATGGATTTGTCTCCCTATCAGGAAACAACAGCAGATGATGAAGATCTAAAGGCTTCAGAAGAATCAAATGTTCTGCACCCAACAATTGCTACCGATTGTAAAGACAGTCAGAGAGGTGGAGATCTTGATAATGGCAAGTCCTGTTATGGAAGTTCTTCTGTAGGTGATGTTCATTTCTCTGGCCCTGATACAGTCTTGCCTAAGATGCAGACTGAAGTGTTTGGTAGCAGCTTTTCTGGCATTTCAGCAGATGTTGGGGTTGACCTCACCTCAAACTCTGAAGAGAAAAAAGCTGATGTATTTTTTGTTGCTGGTCTGGGTGATTCGAAGGAGAAAGATTTTGCATTTTCTGCAGGATCCTCTGTCGAGGTTACGTCATTATATAAGCGTAAACAGAAGAAGAAATTTAGGAGGAAAATAGGGTCCGACTCATTTGTTATCTCTCCAAATGTGAATGGAAAGCCTGTATCTTCCGTACAATTTTCACCACTTACCACTGCCAACATGTCATCACATTCTGATGTGAGGGACAAGTCTCAGATAAATGATCTTTTCGAGGAAGGGGGCGATGCGTCATCTGCTACAATTGAAGCAGCCTGTCACCAATGGAGACTCAGGGGGAACCGTGCTCATAAAGCTAAGGAATTTTCTAAAGCTGAGGAACTCTACACACAAGGAATAAATTCTGTCCCTTCTAGTGAAAGATTAGGATGCGGCATTAAGCCTTTTTTACTGTGCTATAGCAACCGTGCAGCAACACGTATGAGTCTTGGAAGGATTAGAGAAGCTCTAGAGGATTGCACAATGGCTTCTTCTTTGGACCCCACCTTTCTGAAAGTACAGATGAGAACTGCTAACTGTCACCTTTTGCTAGGGGATGTAGAAAATGCTCAGAGATGTTATAACAAGTGCTTGGAGTCCGGTAAAGTTGTTTGTTTGGATCGGAGAGTAACAGTAGAAGCAGCTGAAGGTTTACAGAAAGCTCAGGAAGTGGTTAAGTGCATGAATGCTGCTGCTGAGCTTTTGAAAGAGAGGACTTTGGATGCAGCTGGTTCTGCTTTAGAACTACTTACAAAGGCATTGTCAAAGAGTTTATACTCAGAAAGATTGCTCCAAATGAAGGCGGAGGCTCTGTATTTGCTGCAAAAGTATGATGCAGCAGTTCAGCTTTGTGAACAGAGTCTGAATCTTGCAGAAAAGAACTTTCGCATGGCAAACAGTGCAGACAATTCTAATAATCCCATCCATGATAGTTACTCAAGTGTAAAATTGTGGAGATGGTCATTGATATCTAAGTGTTACTTTCGTTTGGGAAGGCTGGATGCATCACTTAATGTTATTGAAAAATTACAGCAAACAGCATCTGTCAATGACAAGTGTGTGATTGACATTAAAGACTTGTTGTCATTAGCTGCTACAATACAAGAACTTTTGAACCACAGGCATGCAGGAAATGAGAACTTTAAATTGGGAAATTATTCAGAAGCAGTGGAGAACTACACTGCTGCTTTATCTAGTAATATCAAATCACGACCTTTTGCAGCAATTTGTTTTGGCAACCGTGCTGCTGCTCATCAAGCTTCAGGCCAAATTGCTGATGCCATTGCGGATTGCAGCATGGCTATGGCCCTTGATGAAAATTATGCAAAGGCAATTTCTAGAAGAGCCACCTTGCATGAGATGGTTAGAGATTATGAACAAGCAGCTTGTGACCTCAGGAGACTTATTTCTGTTCTTGGATCTCAATCCAATGAAAAGGCCAAACATTCTGAATCACCAAATGGATCAAGTGGTGGGAAAGAATCAAGGCAAGCTAAACAGCGTCTGCTTACCGTGGAAGATCAAGCCAAAATGGAGACCTCCCTGGACTTTTATCTCATTTTAGGAATTAAGCCATCGGATACAGCAGCTGATATCAAGAAGGCATATCACAAGGCAGCTCTCAGACATCATCCAGATAAGGCTGGTCAGTTGTTGGCAAGAAGTGAAGTTGGGGATGAAGGCAGTGTCTGGAAGGAAATTTCCCAGGAGGTGCACAAGGATGCTGATAGGCTTTTCAAAATGATTGGAGAGGCATATGCTGTGCTTTCAGACCCTGCCAAGCGCTCGGAGTATGATTTGGAAGAGGACATAAGGAAACTTTACAAACAAAGGAACGGAGGTGGCGCATGCAGGAGATCTTCAGACGTTTATGGGAATGGAAGATCACCCGATGGTTATAGAAATTCCTATGACAGAACTTCTAACAGACGATATGGACATTATTATAAAACATATGGAGATTCATATTCTCGATGGTAA 3669 0.4186 MSPAPMHFPSPINSDDTTPHSPLPFAPFNADAVNPPAAATARVRSKPRLVKLRKQSASQTARSRTRTAATAVENEGSGSGFNPFRSDQVSEGFVFSARKVDSDSVRDLNSEQKESAGVEFVFSAKTNSVSGDESKKLNSEEEKGKVNFTEFVFGAVRNDLHSSFNVEKEKSSVPMWNSGFADYGERECVNEFVFGKQESVDRMRNSGNGPGVFHAETETNGDFDKGGDKCGDLGDDVKSKSGNGSANGFSTIFTDFSDSKLVDEINKLNINDHEGVRIARDSTSSHVSSSNVFVFGGSHKVSSVSSGTNTGGEQLYTNDDSDSDKASGTHGVQNGTAQGIDQDATGIPCSKTTTSQDGIRDFHVSEDAQVNGVEESCTGFKPPAWDPSYFKDNLFCKLNKKFEPTHKSKSSKEKGSKYMRRKLKSHSLNKKQTRLDHLPKENSSLETPESSGGFSPMDLSPYQETTADDEDLKASEESNVLHPTIATDCKDSQRGGDLDNGKSCYGSSSVGDVHFSGPDTVLPKMQTEVFGSSFSGISADVGVDLTSNSEEKKADVFFVAGLGDSKEKDFAFSAGSSVEVTSLYKRKQKKKFRRKIGSDSFVISPNVNGKPVSSVQFSPLTTANMSSHSDVRDKSQINDLFEEGGDASSATIEAACHQWRLRGNRAHKAKEFSKAEELYTQGINSVPSSERLGCGIKPFLLCYSNRAATRMSLGRIREALEDCTMASSLDPTFLKVQMRTANCHLLLGDVENAQRCYNKCLESGKVVCLDRRVTVEAAEGLQKAQEVVKCMNAAAELLKERTLDAAGSALELLTKALSKSLYSERLLQMKAEALYLLQKYDAAVQLCEQSLNLAEKNFRMANSADNSNNPIHDSYSSVKLWRWSLISKCYFRLGRLDASLNVIEKLQQTASVNDKCVIDIKDLLSLAATIQELLNHRHAGNENFKLGNYSEAVENYTAALSSNIKSRPFAAICFGNRAAAHQASGQIADAIADCSMAMALDENYAKAISRRATLHEMVRDYEQAACDLRRLISVLGSQSNEKAKHSESPNGSSGGKESRQAKQRLLTVEDQAKMETSLDFYLILGIKPSDTAADIKKAYHKAALRHHPDKAGQLLARSEVGDEGSVWKEISQEVHKDADRLFKMIGEAYAVLSDPAKRSEYDLEEDIRKLYKQRNGGGACRRSSDVYGNGRSPDGYRNSYDRTSNRRYGHYYKTYGDSYSRW* 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2611 1222 SUPERFAMILY TPR-like 658 858 IPR011990 GO:0005515
Mtr7g2611 1222 MobiDBLite consensus disorder prediction 1038 1062 - -
Mtr7g2611 1222 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 367 1222 - -
Mtr7g2611 1222 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 16 351 - -
Mtr7g2611 1222 MobiDBLite consensus disorder prediction 1 87 - -
Mtr7g2611 1222 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 16 351 - -
Mtr7g2611 1222 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 367 1222 - -
Mtr7g2611 1222 MobiDBLite consensus disorder prediction 405 503 - -
Mtr7g2611 1222 SUPERFAMILY TPR-like 936 1034 IPR011990 GO:0005515
Mtr7g2611 1222 Gene3D Tetratricopeptide repeat domain 772 923 IPR011990 GO:0005515
Mtr7g2611 1222 MobiDBLite consensus disorder prediction 429 443 - -
Mtr7g2611 1222 ProSitePatterns Nt-dnaJ domain signature. 1142 1161 IPR018253 -
Mtr7g2611 1222 MobiDBLite consensus disorder prediction 413 428 - -
Mtr7g2611 1222 Coils Coil 837 857 - -
Mtr7g2611 1222 Gene3D DnaJ domain 1066 1178 IPR036869 -
Mtr7g2611 1222 PRINTS DnaJ domain signature 1081 1099 IPR001623 -
Mtr7g2611 1222 PRINTS DnaJ domain signature 1099 1114 IPR001623 -
Mtr7g2611 1222 PRINTS DnaJ domain signature 1137 1157 IPR001623 -
Mtr7g2611 1222 Coils Coil 781 801 - -
Mtr7g2611 1222 MobiDBLite consensus disorder prediction 327 359 - -
Mtr7g2611 1222 Pfam DnaJ domain 1079 1162 IPR001623 -
Mtr7g2611 1222 MobiDBLite consensus disorder prediction 444 462 - -
Mtr7g2611 1222 MobiDBLite consensus disorder prediction 52 86 - -
Mtr7g2611 1222 ProSiteProfiles dnaJ domain profile. 1079 1165 IPR001623 -
Mtr7g2611 1222 Gene3D Tetratricopeptide repeat domain 932 1051 IPR011990 GO:0005515
Mtr7g2611 1222 Gene3D Tetratricopeptide repeat domain 654 771 IPR011990 GO:0005515
Mtr7g2611 1222 CDD DnaJ 1079 1154 IPR001623 -
Mtr7g2611 1222 SMART dnaj_3 1078 1157 IPR001623 -
Mtr7g2611 1222 MobiDBLite consensus disorder prediction 1174 1201 - -
Mtr7g2611 1222 MobiDBLite consensus disorder prediction 1038 1060 - -
Mtr7g2611 1222 MobiDBLite consensus disorder prediction 302 361 - -
Mtr7g2611 1222 SMART tpr_5 880 913 IPR019734 GO:0005515
Mtr7g2611 1222 SMART tpr_5 971 1004 IPR019734 GO:0005515
Mtr7g2611 1222 SMART tpr_5 656 689 IPR019734 GO:0005515
Mtr7g2611 1222 SMART tpr_5 1005 1038 IPR019734 GO:0005515
Mtr7g2611 1222 SMART tpr_5 933 966 IPR019734 GO:0005515
Mtr7g2611 1222 SMART tpr_5 700 733 IPR019734 GO:0005515
Mtr7g2611 1222 SMART tpr_5 824 857 IPR019734 GO:0005515
Mtr7g2611 1222 SMART tpr_5 734 767 IPR019734 GO:0005515
Mtr7g2611 1222 MobiDBLite consensus disorder prediction 302 317 - -
Mtr7g2611 1222 SUPERFAMILY Chaperone J-domain 1057 1161 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2611 Mtr-Chr7 42727983 42739278 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2611 K09527 - gmx:100809278 1333.16