Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2566 ATGGCGACTGAAAATGGAGGAGGACAAAACGGAACCACCGAAACTGCAATAACAACGATGGAGATCGAAAACGGAGATATAACAACACAACCACAATTACAAGAACAACCTCAGTGTTTGTTCACGAAGAAGGATAATGGAAGCATAGAGAGTCATCGTTACTACTTATCTCGCAGAACAGTTCTTGAGATGCTCAAAGACAGAGGGTACTCTATCCCCTCTGATGAAATCCAGCTTTCTCTTGATGATTTCCGCCAAATTCATGGCCAATCTCCTGATGTTGATCGTCTCCGTTTAACTGCTACTCATGCCACTAACCCCTCCAAAAGGATTTTGGTGGTTTTTAGTGGGCCAGGGATAGTGAAAGTGAATGGAGTAAGAGACATAGCAGGACAGATTGTGAATAGAGAGAGTTTGACTGGTCTTATTTTGATTGTGCAAAATCAAATTACTAGTCAAGCTTTGAAAGCTGTTAATCTTCTCTCTTTTAAGGTTGAAATTTTTCAGATCACAGACTTGCTTGTTAATGCTACAAAGCATGTATTGAAGCCAAAACATCAGGTGTTGACTGATAAGCAGAAAAAGAATCTCCTGAAGAAGTACGATATACAAGAAAAGCAGCTTCCCCGAATGCTACAGACAGATGCGATTGCTCGATATTATGGACTTCAGAGGGGGCAGGTAGTTAAAGTTACCTACACCGGTGAAATCACCCAGATGCATGTTACCTATCGATGCGTTTGGTGA 747 0.4137 MATENGGGQNGTTETAITTMEIENGDITTQPQLQEQPQCLFTKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLRLTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKAVNLLSFKVEIFQITDLLVNATKHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQTDAIARYYGLQRGQVVKVTYTGEITQMHVTYRCVW* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2566 248 Pfam RNA polymerase Rpb5, C-terminal domain 175 247 IPR000783 GO:0003677|GO:0003899|GO:0006351
Mtr7g2566 248 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A 30 248 - -
Mtr7g2566 248 SUPERFAMILY RPB5-like RNA polymerase subunit 173 248 IPR035913 -
Mtr7g2566 248 PIRSF RPB5 43 248 IPR014381 -
Mtr7g2566 248 SUPERFAMILY Eukaryotic RPB5 N-terminal domain 48 176 IPR036710 GO:0003677|GO:0003899|GO:0006351
Mtr7g2566 248 Gene3D - 173 248 IPR035913 -
Mtr7g2566 248 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 30 248 IPR014381 -
Mtr7g2566 248 Gene3D - 45 172 IPR036710 GO:0003677|GO:0003899|GO:0006351
Mtr7g2566 248 Pfam RNA polymerase Rpb5, N-terminal domain 50 132 IPR005571 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2566 Mtr-Chr7 42299225 42303542 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2566 K03013 - gmx:100306033 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2566 7 42299225 42303542 Mtr7g2566 7 42299225 42303542 ECH