Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2553 ATGGCGCTGAACACGGTGTCATCGGTTTCTCTTTCTCAAGTGCTACGTCTCTCCGATACAATCGGTAACCGTCACTTGTTCGTAGACTTCGCTCCATTCCGCCGTAATACCAAGCGGTGCAACCGTAGATTGACGCCGGCGATTCTCCGTCGGAGCTCCGTTAAAGCTGTTCTTCAACTTGATAATAATCATCTCAATCCTGCTCCTCCTCCTTCTTCGCCGTCAACTTCCGATTCCAAACCCAAGGTTGCAAACTTGGAGGACATACTATCAGAAAGAGGGGCCTGTGGTGTTGGATTCATTGCCAATTTGGAAAATAAGGGATCATTTGAGATTGTCAAGGATGCTTTAAATGCTTTAAGCTGTATGGAACATCGTGGGGGCTGTGGTGCAGATAATGACTCAGGTGATGGTTCTGGGCTGATGACTGCAGTTCCATGGGATCTATTTGACAATTGGGCAAACGAGCAAGGGCTTGCTTCCTTTGATAAGTTGCACACTGGCGTTGGAATGGTTTTCCTACCCAAAGATGTAGAACTTATGAATAAGGCCAAGAAAGTTATTGTAAATACTTTTCAGCAAGAAGGTCTTGAGGTGCTTGGGTGGAGGCCAGTCCCTGTAAATACTTCTGTTGTAGGTTATTATGCAAAGGAGACCATGCCCAATATACAGCAGGTATTTGTCAAGATTGGGAAGGAAGAAAATACTGAAGACATTGAACGAGAACTGTACATCTGTCGAAAACTTATTGAAAAAGAAGTAAGCTCGGAAAGTTGGGGAAATGAGCTTTATTTCTGTTCTTTATCCAATCGAACAATAGTTTACAAGGGGATGCTCCGCTCAGAAGTTTTGGGGTTATTTTATTCTGATCTTCAGAATGATCTTTATAAATCCTCCTTTGCCATTTATCATCGAAGGTATAGCACAAATACTAGTCCTAGATGGCCTCTTGCACAACCAATGAGACTTCTTGGTCATAATGGAGAAATCAACACCATACAGGGGAACTTGAATTGGATGCAGTCACGAGAGCCGTCATTAAAGTCACCTGTATGGCGAGGTCGTGAAAATGAAATTCGTCCATTTGGAAATCCAAAGGCATCAGACTCGGCAAATCTTGACAGTGCTGCAGAATTATTAATAAGAAGTGGTCGAACCCCTGAGGAGTCCATGATGATTCTTGTTCCAGAGGCTTACAAGAACCATCCAACACTGACAATCAAATACCCTGAGGCGATTGACTTCTATGACTACTACAAAGGCCAGATGGAAGCTTGGGATGGACCTGCCTTGCTTTTATTCAGTGATGGAAAAACTGTTGGTGCGTGCCTTGATCGTAATGGACTTCGACCTGCCAGGTATTGGCGAACATCAGACAATATGGTCTATGTTGCTTCTGAGGTTGGTGTTGTACCAGTGGACGAGTCAAAGGTTATCTCGAAAGGCCGATTAGGTCCAGGCATGATGATAACAGTTGATTTACTTGGTGGCCAGGTCTATGAGAATATGGAGGTTAAAAAACGAGTAGCCTTATCAAACCCATATGGGAACTGGATCAAGGAAAATCTGCGGTCTTTGAAGTCTGAGAATTTCCTTTCATCCTCGGTGATGGAGAATGATGCAGTATTAAGACACCAACAGGCATTTGGGTACTCCAGTGAAGATGTCCAGATGGTGATCGAGTCTATGGCTTCTCAAGGAAAGGAACCTACATTTTGTATGGGAGATGATATTCCATTGGCTGCATTATCTCAGAAACCTCACATGCTTTTTGATTACTTTAAGCAACGGTTTGCACAGGTTACAAATCCTGCAATTGATCCACTCCGAGAAGGGTTAGTTATGTCTCTTGAAGTAAATATAGGGAAGAGACGGAATATATTGGAAATTGGACCTGAGAATGCTTCACAGGTTATATTATCTAGTCCGGTATTGAATGAAGGGGAACTTGAGTCATTGTTAAAAGACTCCCACTTAAAACCACAAGTGTTGCACACATTTTTTGACATAACTAAGGGGATTGATGGTTCCTTGGAGAAAGCATTAAATAAGCTTTGCGACGCTGCCGATGAAGCTGTTAGAAATGGTTCCCAGCTACTTGTTCTTTCAGACCGTTCAGAAGCACTGGAACCAACTCATCCCGCAATTCCAATACTTCTTGCTGTTGGTACTGTTCATCAGCATCTAATCCAGAATGGACTTCGGATGTCAGCTTCAATTGTAGCGGATACTTCTCAGTGCTTTAGCACTCATCAGTTTGCCTGTTTAATAGGATATGGTGCAAGTGCTGTGTGCCCATACTTGGCACTGGAGACATGTCGTCAATGGCGTTTAAGTAATAAAACAGTAAATCTGATGAAGAATGGAAAGATGCCTACTGTATCAATTGAACAGGCACAGAAAAACTACTGCAAGGCTGTCAAAGCAGGTCTTCTTAAAATTCTTTCCAAAATGGGCATCTCATTGCTTTCAAGTTACTGTGGTGCACAGATATTTGAAATCTATGGATTAGGGAAGGAAGTTGTGGATCTTGCATTCAGCGGAAGTGTATCGAAAATTGGTGGTTTAACTTTTGATGAGCTAGCTAGAGAGACTCTGTCTTTCTGGGTGAAGGCATTCTCTGAAGATACAGCTAAAAGATTGGAAAATTTTGGATTTATAGTGTTCAGACCAGGAGGTGAGTATCATGCAAACAATCCAGAGATGTCAAAGTTGCTTCACAAAGCTGTTCGTCAGAAAAGCCAAAATGCCTTTTCAGTTTATCAACAATATTTGGCTAATCGACCTGTTAATGTTATCCGTGATCTTCTTGAGTTCAAAAGTGATCGTGCCCCCATACCTGTGGGGAAGGTAGAACCTGCTTTATCTATTGTGAAACGGTTTTGCACCGGTGGGATGTCTCTTGGAGCTATATCTAGGGAAACTCATGAAGCAATTGCAATTGCAATGAACAGAATAGGTGGAAAGTCAAATTCAGGGGAAGGTGGTGAGGATCCTATTCGCTGGAAACCACTTACTGATGTTGTTGATGGTTACTCTCCAACTCTTCCACATCTTAAAGGTCTTCAAAATGGGGATACTGCTACTAGTGCTATCAAACAGGTTGCTTCAGGAAGGTTTGGTGTCACTCCAACATTCTTGGCAAATGCTGATCAATTAGAAATTAAAATTGCACAAGGTGCAAAGCCTGGTGAAGGTGGACAATTGCCTGGGAAAAAAGTTAGCATGTATATTGCAAGGTTGAGAAATTCTAAACCAGGGGTTCCTCTTATATCTCCACCTCCTCATCATGACATTTACTCTATTGAAGATCTTGCACAATTGATCTTTGATCTTCACCAGGTGAACCCTAAGGCCAAAGTATCTGTAAAACTGGTGGCTGAAGCTGGAATTGGCACTGTTGCATCCGGGGTTGCAAAGGGCAATGCTGACATCATACAGATATCAGGACATGATGGGGGAACAGGAGCAAGCCCTATAAGTTCCATCAAACATGCAGGAGGTCCTTGGGAACTCGGACTTACAGAATCTCACCAGACACTAGTTGAAAATGGACTCAGAGAAAGAGTTATTCTCAGAGTTGATGGTGGATTTAGAAGTGGAGTTGATGTCATGATGGCAGCAATAATGGGTGCTGATGAATATGGGTTTGGTTCAGTGGCAATGATTGCTACTGGATGTGTTATGGCTCGCATTTGCCACACCAACAATTGTCCAGTTGGTGTTGCCAGTCAGAGGGAAGAGTTGCGTGCACGTTTTCCTGGTGTTCCTGGTGATCTTGTTAACCTCTTCTTGTACGTAGCTGAGGAGGTAAGAGGCACTTTGGCACAGTTGGGGTATGAGAAGTTAGATGATATAATTGGCAGAACAGAATTATTGAGACCAAGAGACGTATCTCTTGTGAAAACTCAGCATCTAGATCTGAGCTATATCCTCTCTAATGTTGGGTTACCTAAATTGAGCAGTACAGAAATCAGAAATCAGGAGCCACATACCAACGGTCCTGTCCTGGATGATGTTTTACTAGCAGACCCAAAGATTGCAGATGCCATTGAAAATGAAAAAGCTGTTAGCAAGACCATAAAGATATACAACGTTGATCGTTCTGCCTGTGGGCGTATAGCTGGTGTTATTGCAAAGAAATACGGTGACACTGGTTTTGCTGGACAGTTGAATATTACATTTACAGGAAGTGCTGGTCAGTCATTTGGGTGCTTTCTGACACCAGGAATGAATATTCGCCTTGTAGGAGAGGCAAATGATTATGTTGGGAAGGGCATTGCTGGAGGTGAATTGGTTGTCACTCCAGTTGACAAGATAGGGTTTCAACCTGAGGATGCAGCTATTGTGGGGAACACTTGCTTGTACGGGGCCACAGGAGGGCAGGTCTTTGTTAGAGGGAAAGCTGGGGAAAGGTTTGCTGTCAGAAACTCACTTGCTGAAGCTGTAGTTGAAGGCGCAGGAGATCATTGTTGTGAGTACATGACTGGTGGCTGTGTGGTTATCCTGGGAAATGTGGGTAGAAACGTAGCTGCTGGAATGACAGGAGGGTTGGCTTACATTCTTGACGAGGACAACACTCTCATTCCCAAGATAAACAGAGAAATTGTTAAAATTCAGCGAGTAACAGCACCTGTAGGGCAGATCCAGCTAAAGAAACTAATTGAAGCCCATGTTGAAAAAACGGGTAGCAACAAAGGTGAGGCTATTCTGAAGGACTGGGACAAGTATTTATCACTATTTTGGCAGTTGGTTCCACCTAGTGAAGAAGATACCCCTGAGGCTAATGCCAAGTATGACATAACTGCAACGGAGCAGGTCACTTTGCAGTCTGCTTAG 4839 0.4321 MALNTVSSVSLSQVLRLSDTIGNRHLFVDFAPFRRNTKRCNRRLTPAILRRSSVKAVLQLDNNHLNPAPPPSSPSTSDSKPKVANLEDILSERGACGVGFIANLENKGSFEIVKDALNALSCMEHRGGCGADNDSGDGSGLMTAVPWDLFDNWANEQGLASFDKLHTGVGMVFLPKDVELMNKAKKVIVNTFQQEGLEVLGWRPVPVNTSVVGYYAKETMPNIQQVFVKIGKEENTEDIERELYICRKLIEKEVSSESWGNELYFCSLSNRTIVYKGMLRSEVLGLFYSDLQNDLYKSSFAIYHRRYSTNTSPRWPLAQPMRLLGHNGEINTIQGNLNWMQSREPSLKSPVWRGRENEIRPFGNPKASDSANLDSAAELLIRSGRTPEESMMILVPEAYKNHPTLTIKYPEAIDFYDYYKGQMEAWDGPALLLFSDGKTVGACLDRNGLRPARYWRTSDNMVYVASEVGVVPVDESKVISKGRLGPGMMITVDLLGGQVYENMEVKKRVALSNPYGNWIKENLRSLKSENFLSSSVMENDAVLRHQQAFGYSSEDVQMVIESMASQGKEPTFCMGDDIPLAALSQKPHMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRRNILEIGPENASQVILSSPVLNEGELESLLKDSHLKPQVLHTFFDITKGIDGSLEKALNKLCDAADEAVRNGSQLLVLSDRSEALEPTHPAIPILLAVGTVHQHLIQNGLRMSASIVADTSQCFSTHQFACLIGYGASAVCPYLALETCRQWRLSNKTVNLMKNGKMPTVSIEQAQKNYCKAVKAGLLKILSKMGISLLSSYCGAQIFEIYGLGKEVVDLAFSGSVSKIGGLTFDELARETLSFWVKAFSEDTAKRLENFGFIVFRPGGEYHANNPEMSKLLHKAVRQKSQNAFSVYQQYLANRPVNVIRDLLEFKSDRAPIPVGKVEPALSIVKRFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWKPLTDVVDGYSPTLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLANADQLEIKIAQGAKPGEGGQLPGKKVSMYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTESHQTLVENGLRERVILRVDGGFRSGVDVMMAAIMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNLFLYVAEEVRGTLAQLGYEKLDDIIGRTELLRPRDVSLVKTQHLDLSYILSNVGLPKLSSTEIRNQEPHTNGPVLDDVLLADPKIADAIENEKAVSKTIKIYNVDRSACGRIAGVIAKKYGDTGFAGQLNITFTGSAGQSFGCFLTPGMNIRLVGEANDYVGKGIAGGELVVTPVDKIGFQPEDAAIVGNTCLYGATGGQVFVRGKAGERFAVRNSLAEAVVEGAGDHCCEYMTGGCVVILGNVGRNVAAGMTGGLAYILDEDNTLIPKINREIVKIQRVTAPVGQIQLKKLIEAHVEKTGSNKGEAILKDWDKYLSLFWQLVPPSEEDTPEANAKYDITATEQVTLQSA* 1613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2553 1612 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 66 1611 - -
Mtr7g2553 1612 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 96 495 IPR017932 -
Mtr7g2553 1612 PANTHER FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1, CHLOROPLASTIC/MITOCHONDRIAL 66 1611 - -
Mtr7g2553 1612 CDD GltS 96 513 - -
Mtr7g2553 1612 SUPERFAMILY FMN-linked oxidoreductases 540 1317 - -
Mtr7g2553 1612 Pfam Glutamine amidotransferases class-II 96 518 IPR017932 -
Mtr7g2553 1612 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 96 632 IPR029055 -
Mtr7g2553 1612 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 1330 1593 IPR036485 GO:0016491
Mtr7g2553 1612 MobiDBLite consensus disorder prediction 62 82 - -
Mtr7g2553 1612 Pfam Glutamate synthase central domain 545 837 IPR006982 GO:0006807|GO:0015930
Mtr7g2553 1612 Pfam Conserved region in glutamate synthase 896 1280 IPR002932 GO:0006537|GO:0015930|GO:0016638
Mtr7g2553 1612 Gene3D - 1318 1593 IPR036485 GO:0016491
Mtr7g2553 1612 CDD gltB_C 1337 1587 IPR002489 GO:0016491
Mtr7g2553 1612 Pfam GXGXG motif 1362 1544 IPR002489 GO:0016491
Mtr7g2553 1612 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 96 522 IPR029055 -
Mtr7g2553 1612 Gene3D Aldolase class I 522 888 IPR013785 -
Mtr7g2553 1612 CDD GltS_FMN 899 1294 IPR002932 GO:0006537|GO:0015930|GO:0016638
Mtr7g2553 1612 Gene3D Aldolase class I 570 1296 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2553 Mtr-Chr7 42152855 42174938 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2553 K00284 - gmx:548016 2956.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2553 7 42152855 42174938 Mtr7g2553 7 42152855 42174938 ECH