Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2548 ATGGACTCTATCAGCACAAGTAGCACCAGTTCATCAGTGATTAGTACTGTACAACAAAAAACACCAACAAAGCTGACCAAACCCAAGAAGAAAAAGAACAACAACAACACCTACAACAAACCTATCAAGGTAGTGTACATATCAAACCCTATGAAGGTTAAGACTAGTGCCTCTGAATTTAGGGCACTGGTCCAAGAACTCACCGGTCAGTACGCTGAATCGCCGCCAAACCCTTCTAGGTTTCAAGAGTTTGACGTCAATGATAGCGGTACTGACCAGGGTGGTTGTGAGAATATGATGGATTGTGATAAAAGTGATCAAACAGTTGTGGGGGTGCCTTCTCTTGTGGATCCCGATGATAAAGGGAAACCTAGTGAAGCTGGCTCATCAAATGAGAGTTTTGATGAAGATGTACTTTTGATGCCTGAGATGATGGACAACATTTGGGATCTGCTTCCAACAAGTGCATTCTATGAATCTTTCCAACTTGATAGCTAG 498 0.4257 MDSISTSSTSSSVISTVQQKTPTKLTKPKKKKNNNNTYNKPIKVVYISNPMKVKTSASEFRALVQELTGQYAESPPNPSRFQEFDVNDSGTDQGGCENMMDCDKSDQTVVGVPSLVDPDDKGKPSEAGSSNESFDEDVLLMPEMMDNIWDLLPTSAFYESFQLDS* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2548 165 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 16 160 - -
Mtr7g2548 165 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 16 160 IPR039335 GO:0051091
Mtr7g2548 165 MobiDBLite consensus disorder prediction 70 94 - -
Mtr7g2548 165 Pfam VQ motif 47 72 IPR008889 -
Mtr7g2548 165 MobiDBLite consensus disorder prediction 70 136 - -
Mtr7g2548 165 MobiDBLite consensus disorder prediction 1 23 - -
Mtr7g2548 165 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2548 Mtr-Chr7 42105859 42106615 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2548 - - mtr:MTR_7g089860 290.041