Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2541 ATGTCATTGGCAAACCACTCAGTACCAAGATTGGTGAATCAAGGGGATTGCAAGGTTTCTCTTTTAGATTTACCTGATGAACTTGTGGATTGCATCCTCAAGTTTCTTTCACCACAAGATTTGTTTAGGGTAGCACAAGTGTGTACCCATTTGAGGAATATTAGTAGAAGGGATCATTTGTGGGAGAAACATGTGGAACAAAAATGGAGCAGGTTGCTAGGTAATGATGCTTACCATGAATGGGAGTATCATACAACAAAATATAAGGAACTATTAGTGGATCAGAATCTGAGTGACTCATTAGGAACTACTAGTGGTAATTCTTCATTTCAACGAATTCATTCTTATTTGAGAATCAATAGATCCATGACTGATTTGATTAAAAATCATTCAAAAATGGCTCTATATATTTTTCTTGAGACTGGCCGTTTCTGGTTTCCTGCTCAAGTTTATAAGGCTACACTGTTAACATTATACTGTTATGATGCCATTGTTACTTATGATTCTAAAACAAACACCTTTCAAACGAGGACTCCACATGGCAGAAGGCGAGTGATTGAGAGAGATATTCCCTGGAATATGTTGAGGATGCCACCACCAAAGACTTACTTAGTGGATTATTATGAGTATAACGATCTGAATAATTTGAAACCAGGAGATTATATCGAGATTCAAACTAGAGGAAGGAAAGCATTCCCTCTTTATGATTGGGCGCATGCTGTAGTTTGCCATTTGGAGTCATGTGACCAGGATGTTAATCATTGCTCATGCAAAGATAATGACATTTTGGTTATGGGGTTTTCCAGATGCAACTTCTACAAGGAGTATTCATTGAGTAAATCAATGAAACATGCCCAAGCATATGTAGAATTCAACTTTCTCAATGGAATCAGAAAACTCAACGAGCAGGAGATTGAAAAGTGGAACAACGTCATTTTGACTAGAAATAATAGGTTCGCACCTATTGAATGA 972 0.3714 MSLANHSVPRLVNQGDCKVSLLDLPDELVDCILKFLSPQDLFRVAQVCTHLRNISRRDHLWEKHVEQKWSRLLGNDAYHEWEYHTTKYKELLVDQNLSDSLGTTSGNSSFQRIHSYLRINRSMTDLIKNHSKMALYIFLETGRFWFPAQVYKATLLTLYCYDAIVTYDSKTNTFQTRTPHGRRRVIERDIPWNMLRMPPPKTYLVDYYEYNDLNNLKPGDYIEIQTRGRKAFPLYDWAHAVVCHLESCDQDVNHCSCKDNDILVMGFSRCNFYKEYSLSKSMKHAQAYVEFNFLNGIRKLNEQEIEKWNNVILTRNNRFAPIE* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2541 323 SUPERFAMILY F-box domain 12 72 IPR036047 GO:0005515
Mtr7g2541 323 Gene3D - 11 99 - -
Mtr7g2541 323 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Mtr7g2541 323 SMART fbox_2 24 64 IPR001810 GO:0005515
Mtr7g2541 323 Pfam F-box domain 21 63 IPR001810 GO:0005515
Mtr7g2541 323 PANTHER F-BOX PLANT-LIKE PROTEIN 4 317 - -
Mtr7g2541 323 PANTHER ESTS AU081301(E20138) 4 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2541 Mtr-Chr7 42023742 42025761 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2541 - - mtr:MTR_6g039460 490.73