Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2540 ATGATGTCATTGGAAAACCACTCAGTACCAAGATTGAAGAATCAAGGGGATTGCAAGGTTTCTCTTTTAGATTTACCTGATGAACTTGTGGATTGCATCCTCAAGTGTCTTTCACCACAAGATTTGTTTAGGGTAGCACAAGTGTGTACCCATTTGAGGAATATTAGTAGAAGGGATCATTTGTGGGAGAAACATGTGGAACAAAAATGGAGCAGGTTGCTAGGTAATGATGCTTACCATGAATGGGAGTATCATACAACAAAATATAAGGAACTATTAGTGGATCGGAATCTGAGCGACTCATTAGGAACTACTAGTGGTAATTCTTCATTTCAACGAATTCATTCTTATTTGAGAATCAATAGATCCATGACTGATTTGATTAAAAATCATTCAAAAATGGCTCTATATATTTTTCTTGAGACTGGCCGTTTCTGGTTTCCTGCTCAAGTTTATAAGGCGACATTGTTAACATTACACTGTTATGATGCCATTGTTAGTTATGATTCTAGAACAGACACCTTTCAAACAAGGTGTCCATATGGCAGAAAGCGATTGATTGAGAGAGATATTTCCTGGGATATGTTGAGAATGCCACCGCCAAAGACTTATTTAGTGGATTATTATGAGTATAACGATCTGAATAATTTGAAACCAGGAGATCATATCGAGATTCAAAAGAGAGGGAGGAGATTATTCCCTATTTATGATTGGGCGCATGCTGTAGTTTGCCATTTGGAGTCATGTGACCAGGATGTCAACCATTGCTCATGCAAAGATAGTGACATTTTGGTCATGGGGTTTTCCAGATGCAATTTCCACTTGGAATATTCATTGAGTAAATCAACGAAACATGCAGAAGCATATAGAGAATTCAACTTTCTCAATGGAATCAGAAAACTTGACGAGGAGGAGATTGAAAAGTGGAACAACGTCATTTTGACTAGAAATAATAGGTTGGCGCCTATTGAATGA 975 0.3744 MMSLENHSVPRLKNQGDCKVSLLDLPDELVDCILKCLSPQDLFRVAQVCTHLRNISRRDHLWEKHVEQKWSRLLGNDAYHEWEYHTTKYKELLVDRNLSDSLGTTSGNSSFQRIHSYLRINRSMTDLIKNHSKMALYIFLETGRFWFPAQVYKATLLTLHCYDAIVSYDSRTDTFQTRCPYGRKRLIERDISWDMLRMPPPKTYLVDYYEYNDLNNLKPGDHIEIQKRGRRLFPIYDWAHAVVCHLESCDQDVNHCSCKDSDILVMGFSRCNFHLEYSLSKSTKHAEAYREFNFLNGIRKLDEEEIEKWNNVILTRNNRLAPIE* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2540 324 PANTHER F-BOX PLANT-LIKE PROTEIN 6 318 - -
Mtr7g2540 324 SUPERFAMILY F-box domain 12 73 IPR036047 GO:0005515
Mtr7g2540 324 ProSiteProfiles F-box domain profile. 19 65 IPR001810 GO:0005515
Mtr7g2540 324 Pfam F-box domain 22 64 IPR001810 GO:0005515
Mtr7g2540 324 Gene3D - 12 100 - -
Mtr7g2540 324 SMART fbox_2 25 65 IPR001810 GO:0005515
Mtr7g2540 324 PANTHER ESTS AU081301(E20138) 6 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2540 Mtr-Chr7 42015551 42018444 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2540 - - mtr:MTR_6g039460 487.648