Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2539 ATGACACAAGAGAAGAATTTGATACAAGAGGATCGTAAGGTTTCTCTCTTAGATTTACCTGAGTGGGCTTTAGACTGCATTCTTGAGTACCTTTCACCATTAGATTTATGCAAGGTAGCACAAGTGTGTTCTTGTTTGAGGAATAGAAGCAAAAATGATTATTTATGGGAGAAACAAGTCAATCAAAGATGGGGTGAGTTGCTTGGTGATATAGCTTACCATGAGTGGCAATGGCATACAGCAAAAATGGTCAATGAAGAAATTTTATTGTTACATCAAAATCAGAGTGGATCATGTGGTACTTTTACTGGTGTTTGGCCATCTTTACACCTTCATTCTTATTTGGAAAATTTTAGAGACATGATTAGTTTGCTTAGAAATTGTCCAAAAATGAGTTTGTTTATCGCCCTTGAGACTGGTCAATTCTGGTTTCCTGCTCAAGTTTATAAGAAAGCATTAAGTTGTTATGATGCCCTAATTAGCTATGACTCAAGAAATGACACCTTCAAAGCAAGGAGTCCAAGTAATGGTTGGAGAATTAGAGGAGATGTTGAGTGGGATATGTTGAGAATACCACCACCTCAGACTTTTTTATCTGACTATTATAAACCTAATTATATCAATAATTTGAAACCGGGAGATTATGTTGAGGTTCAGAAGAGAAGGCGCAAAGAATATCCTTATGATTGGTGGTTTGCTATAATTGGTCATTTGGAGTCATGTGATGAAGATATGAATCATTGCCATTGTCAATATAGTGAAACATTAGTAGTGGAGCTTATCCTATATGCCCTCGGGAGTCGATGGAGAAGATCGATGTTGCACAGAAATTTGTATGAAGAACAAGGTTCAAGGATTTGTTGGTTTGGTGGAATTAGAAAACTTAATGAGGAAGAGATTGAAAAGTGGAACAACATCTTGTTATCTAGACAAGATCCTCCACAATATTGGATGTAA 957 0.3636 MTQEKNLIQEDRKVSLLDLPEWALDCILEYLSPLDLCKVAQVCSCLRNRSKNDYLWEKQVNQRWGELLGDIAYHEWQWHTAKMVNEEILLLHQNQSGSCGTFTGVWPSLHLHSYLENFRDMISLLRNCPKMSLFIALETGQFWFPAQVYKKALSCYDALISYDSRNDTFKARSPSNGWRIRGDVEWDMLRIPPPQTFLSDYYKPNYINNLKPGDYVEVQKRRRKEYPYDWWFAIIGHLESCDEDMNHCHCQYSETLVVELILYALGSRWRRSMLHRNLYEEQGSRICWFGGIRKLNEEEIEKWNNILLSRQDPPQYWM* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2539 318 Pfam F-box domain 17 58 IPR001810 GO:0005515
Mtr7g2539 318 PANTHER F-BOX PLANT-LIKE PROTEIN 8 313 - -
Mtr7g2539 318 SMART fbox_2 19 59 IPR001810 GO:0005515
Mtr7g2539 318 PANTHER ESTS AU081301(E20138) 8 313 - -
Mtr7g2539 318 ProSiteProfiles F-box domain profile. 13 59 IPR001810 GO:0005515
Mtr7g2539 318 Gene3D - 3 93 - -
Mtr7g2539 318 SUPERFAMILY F-box domain 11 67 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2539 Mtr-Chr7 42008551 42010418 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2539 - - gmx:100795992 402.519