Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2513 ATGGATTCATCGTTGGTTTCTAACAACGATGTTGCTTCTGGGTTTGTTAAAGAGTCAATGGTTGACCCTTTTCTGGTTGAGGCTCTTCAGAATCCTCGCCATCGTTTAACGATTCTGAGGATGGAGCTAGATATCCAGAAATTTATGAACAATGCTGATCAGCAGCATTTTGAGTTTCAACATTTCCCTTCTTCTTATCTCCGACTGGCTGCACATCGTGTTGCTCAACACTATGGTATGCAAACAATGGTTCAAGATATTGGCTTAGATGGACAGAGTAAAATTCTGGTCAGAAAGTTACCCGAAAGCAAGTATCCCGTGGTTCGCTTATCTGAAATACCTGCTAAACAGTTGGACAATGAGAAATCCGAGCTGAAAAAAATTGTCATTCAATCTAGGCCTCATAAAACTAGTTTGAATGGAGCCAATGATTCCACAAAAAAAGGAAACCCTCTGAGAAGTGTGGAAGAGAGGAAGGAGGAGTATGATCGGGCAAGAGCACGTATCTTTAATGGCTCTACAAGCTTTGATTCAGTTGATACCTCATCCATGGTCCCGACAGATGGGAAGAATTCTTTTATGAGCAAGGATGAGAGTGAAATTAGCAAAATCCCCATGGCTGATTCAGAAAGATTTTTTAGTGTCAGGGATAATAGTTATCCTCGAGTTGCCATTATCAGAGATAGGGAAAAGGATCGAAGCGATCCAGATTATGATCGTAGCTATGGAAGGTATGCTAGGAGTTTATCAGCCTCTGCTGTTAACCTGGTGCCTTTTAATTTGCCAAAAGCTCAACCTTCATTTGCTCCGTATGAAACTACTTTTAATCAGTTGGGTCAGATGCCACAAGCTCAAGCTTCACTTGGATATGGACCTCCTTCAACCCCGATGATGAGTCCTTTTTGTACCCCAGGATTGAATCCGGCATCTGGGGATGGTGCTTACCTACAATGGCCAAGTCCTACAATGATGTATGCTCATTCATATGACCAATTTAGACATGCTGTTTACCAGTCTCCATTTGGTCAACCATTGAGCTTTGACTATTCACAGAACTATTAG 1062 0.4181 MDSSLVSNNDVASGFVKESMVDPFLVEALQNPRHRLTILRMELDIQKFMNNADQQHFEFQHFPSSYLRLAAHRVAQHYGMQTMVQDIGLDGQSKILVRKLPESKYPVVRLSEIPAKQLDNEKSELKKIVIQSRPHKTSLNGANDSTKKGNPLRSVEERKEEYDRARARIFNGSTSFDSVDTSSMVPTDGKNSFMSKDESEISKIPMADSERFFSVRDNSYPRVAIIRDREKDRSDPDYDRSYGRYARSLSASAVNLVPFNLPKAQPSFAPYETTFNQLGQMPQAQASLGYGPPSTPMMSPFCTPGLNPASGDGAYLQWPSPTMMYAHSYDQFRHAVYQSPFGQPLSFDYSQNY* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2513 353 Pfam R3H domain 37 87 IPR001374 GO:0003676
Mtr7g2513 353 PANTHER OS05G0411600 PROTEIN 16 352 - -
Mtr7g2513 353 CDD R3H_encore_like 34 99 - -
Mtr7g2513 353 MobiDBLite consensus disorder prediction 133 157 - -
Mtr7g2513 353 Pfam SUZ domain 127 173 IPR024771 -
Mtr7g2513 353 SUPERFAMILY R3H domain 19 122 IPR036867 GO:0003676
Mtr7g2513 353 ProSiteProfiles R3H domain profile. 35 101 IPR001374 GO:0003676
Mtr7g2513 353 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 16 352 - -
Mtr7g2513 353 Gene3D - 16 134 IPR036867 GO:0003676
Mtr7g2513 353 ProSiteProfiles SUZ domain profile. 104 174 IPR024771 -
Mtr7g2513 353 MobiDBLite consensus disorder prediction 133 149 - -
Mtr7g2513 353 SMART R3H_4 19 100 IPR001374 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2513 Mtr-Chr7 41642612 41647289 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2513 - - gmx:100814835 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2513 7 41642612 41647289 Mtr7g2513 7 41642612 41647289 ECH