Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2502 ATGACAGAAGTGTCGATGTGTTACATCAACAGCTCCGAACTGAGTCCAGATGAAGAGAGAATCATGATCAGAGACATTGCTCTTTCTTCTCAAACTACTCCCAAAGAAGGCGACACCTTTTTCATCATCACTCAGAGATGGTGGCAACATTGGATTGAATACGTGAACCAAGATCAGGCAAACCCTTCTTATGATGGATCTTCCTTTCCTGAACACAGCGATTTGGTCAGTTCAAGTGCTATAAAGAGGCCAGCTGGTATTGATAATTATGATTTGATCGATAATACTGGATCAGAAGACTCTAGTACGGGTATTGAAATTCATGATACACTGTTAGAAGGGCGTGACTATGTATTACTTCCTCGAGAGGTTTGGGACCAATTATTTAAATGGTATGGTGGTGGACCTACATTGGAGAGGAAAGTTATTAGTTCAGGTCTGTCCCAGACAGAATTTGCAGTAGAGGTGTATCCTTTACGGCTTCAATTACTTGTGTTAACAAGAAATGTTCGATCTACTATAAGAATAAGCAAGAAGGAAACCATTGGACAGCTACACAAAAGAGCTTGTGAAATATTCGATCTTCTGTTGGACCAAGTGCGCATTTGGGATTACTATGGCCATCGGAAGCATGCCTTGATGAATGACATGGACAAAACTCTAGATGATGTCAATCTACAAATGGACCAAGATATTCTTGTTGAGGTCGTAAACAATACAAGTTCTGCTCAAGAAAATGGATCAGTACATAGGGAAGCGAATTCTGTTCTTGTGGAGCCTACAAAATCAAGCGTATCAACTGCTGGTGGCCTGTCTACTAGCAAGGGTGCATCTAGAGGCAACAATGTCGAATATTATTCATCTCAGAAACTAAATTCTCCTGTCAGAGATTCAGAAAACCCTTATGGTACTCTTGGTGTCACCACAAGAGGTTCATTCGGTGGTCTCATTGGGTTGCTAAATCTTGGCAATACTTGTTTCATGAATAGTGCAATACAGTGCCTTGTTCATACACCAGAGTTCGCTAGGTACTTTAGGGAGGACTATCATCAAGAGATAAATTTTCAAAATCCACTCGGCATGGTTGGTGAACTAGCCCTAGCATTTGGTGAGTTGCTTCGAAAACTATGGGCACCTGGGCGAACACCAATTGCTCCTCGCCCTTTTAAAGCAAAGCTTGCTCGTTTTGCACCTCAGTTCAGTGGGCACAACCAACACGATTCTCAGGAGCTCTTAGCATTTCTGCTGGATGGTCTCCATGAAGACTTAAATCGTGTAAAGCACAAACCATATATAAAGTCTCGAGATGCTGATGGCCGACCCGATGAAGAAGTGGCTGATGAATATTGGGCAAATCATATTTCTCGTAATGATTCCATAATTGTTGATGTGTGCCAGGGACAATACAAGTCGACTTTGGTGTGTCCAGTTTGCAACAAAGTCTCTGTCACATTTGATCCTTTCATGTACCTTTCCCTGCCTCTCCAGTCCACCACCAATAGGACCATGACTGTGACAGTTTTTAGTTGCGACAGTATTACCCTGCCTTCGCCGTGTACAGTAACTGTGCCCAAGCAGGGACGATGCAGAGATCTTATACAAGCACTTAGCAATTCTTGCTCATTGAAGCATAACGAGAGGATAGTGCTTGTGGAGATACGAAACCATTTGATCCATAGATATTTTGAAGATCCTCTTCAATTGTTGTCCTCAATTAAAGATGATGACCGCCTTGCCGCTTACAAGATTACAAAGATGGACAAAAACACTAAGTACCTCCAGTTGATACATCGCCGCAGAGAGCAGAGTAGTGACTCGCATACCATTTCAGGATGGAAACCATATGGAACACCTATTGTTTCGTTGATCTCATCTGATGATAAAATCACAAGAGGTGACATACAAGTAATGGTTAATCGTATACTCTCTCCTCTTCTGTTGAAAGGTGACAATGCACAACAAGCTGCTTCTGCTGAAACTAACGTGGTGTCAAATTCAATAAATAAGGATGATACAGTTTCAAAGGCGACACACCTACCAACATTACCTCTACTATTGGTAGATGATAACAATGCTTGCATTGATCTTTCAATGGGAGAGGAGAAAGTAGTTAAACTGTCACCGTCATCAGCAAGAGTTCTAGTGTATATTGATTGGTCTCAGAAGCTTCTGGAAAAGTATGATACTCGTCCACTTGAGACTTTGCCAGAAGTTTTGAAATATGGGCCTGTAACCAAGAAAGCTCGTACTGAACCTCTCTCTTTGTACACTTGTTTGGAAGCTTTTCTGCGTGAAGAACCTTTGGTGCCTGAAGACATGTGGTACTGTCCTAAATGCAAAGAGAGACGACAAGCAAGCAAAAAGCTTGATTTATGGAGGCTCCCAGAGGTTTTGGTAATTCATTTAAAAAGGTTCTCATACAGCAGGTCAATGAAGCATAAACTCGAGACTTTTGTTAACTTTCCCATTCATGATTTTGATTTAACAAATTACATAGCCAATAAAAACAACTCTCGGCGTCAAGTTTATGAACTCTATGCCCTTACAAATCATTATGGTAGTATGGGTAGTGGACATTATACTGCACATATTAAGCTTTTAGACGAAAACAGGTGGTACAATTTTGATGATAGCCACATATCACTCATAAGTGAAGACGATGTTAATACTGCCGCTGCCTATGTTCTGTTTTACCGGAGGGTGAAAACCGACGATGACATTGTAAGCAATGGGGTTTAG 2739 0.4133 MTEVSMCYINSSELSPDEERIMIRDIALSSQTTPKEGDTFFIITQRWWQHWIEYVNQDQANPSYDGSSFPEHSDLVSSSAIKRPAGIDNYDLIDNTGSEDSSTGIEIHDTLLEGRDYVLLPREVWDQLFKWYGGGPTLERKVISSGLSQTEFAVEVYPLRLQLLVLTRNVRSTIRISKKETIGQLHKRACEIFDLLLDQVRIWDYYGHRKHALMNDMDKTLDDVNLQMDQDILVEVVNNTSSAQENGSVHREANSVLVEPTKSSVSTAGGLSTSKGASRGNNVEYYSSQKLNSPVRDSENPYGTLGVTTRGSFGGLIGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHQEINFQNPLGMVGELALAFGELLRKLWAPGRTPIAPRPFKAKLARFAPQFSGHNQHDSQELLAFLLDGLHEDLNRVKHKPYIKSRDADGRPDEEVADEYWANHISRNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQSTTNRTMTVTVFSCDSITLPSPCTVTVPKQGRCRDLIQALSNSCSLKHNERIVLVEIRNHLIHRYFEDPLQLLSSIKDDDRLAAYKITKMDKNTKYLQLIHRRREQSSDSHTISGWKPYGTPIVSLISSDDKITRGDIQVMVNRILSPLLLKGDNAQQAASAETNVVSNSINKDDTVSKATHLPTLPLLLVDDNNACIDLSMGEEKVVKLSPSSARVLVYIDWSQKLLEKYDTRPLETLPEVLKYGPVTKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPKCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDFDLTNYIANKNNSRRQVYELYALTNHYGSMGSGHYTAHIKLLDENRWYNFDDSHISLISEDDVNTAAAYVLFYRRVKTDDDIVSNGV* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2502 912 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 317 901 IPR028889 -
Mtr7g2502 912 SUPERFAMILY Cysteine proteinases 315 901 IPR038765 -
Mtr7g2502 912 Gene3D - 157 244 - -
Mtr7g2502 912 ProSiteProfiles DUSP domain profile. 14 143 IPR006615 GO:0004843
Mtr7g2502 912 Gene3D Cysteine proteinases 308 545 - -
Mtr7g2502 912 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 843 860 IPR018200 GO:0004843|GO:0006511
Mtr7g2502 912 SUPERFAMILY DUSP-like 14 143 IPR035927 -
Mtr7g2502 912 Pfam Ubiquitin carboxyl-terminal hydrolase 318 898 IPR001394 GO:0004843|GO:0016579
Mtr7g2502 912 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 318 333 IPR018200 GO:0004843|GO:0006511
Mtr7g2502 912 Gene3D - 8 156 IPR035927 -
Mtr7g2502 912 Gene3D Cysteine proteinases 719 908 - -
Mtr7g2502 912 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 12 911 - -
Mtr7g2502 912 CDD Peptidase_C19R 746 899 - -
Mtr7g2502 912 SMART dusp 33 146 IPR006615 GO:0004843
Mtr7g2502 912 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 5 12 911 - -
Mtr7g2502 912 Pfam DUSP domain 37 143 IPR006615 GO:0004843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2502 Mtr-Chr7 41515677 41526851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2502 754 903 Miscellaneous Gene Families AT4G31670 35.294 8.41e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2502 - - mtr:MTR_7g088760 1834.31