Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2472 ATGATTAGGAGTAGAAATTCTCAAATTGGGTCTTCTCCTTCTGGAGGTGGGGCCCATGATATGAAACCAAGGAGGCTTTATCAAGTTTGGAGGGGTGGCAATAAATTTCTCTGTGGTGGGAGACTGGTTTTTGGTCCTGACGTAGCTTCCTTGTTTCTTACAACATTCCTAATTGCTGCACCTGCAATTGCATTTTGTGTTAAGATGTATCTTAAAGCAAAGCATGAGAAGGCCAATAATGGTGATCATCTTTTTTGGTGTCCTGTAGTGATTGTGGGTTCAGTTCTCACTATTCTGGATTTCCTATTCCTTCTCTTGACTTCTGGGAGAGATCCTGGAATTATCCCGAGAAATTCAACACCTCCAGACTATGATGACGCGTTTAATATACCTACTCCTTCTATGGAGTGGATTAATGGTTCGACCCCTCATTTAAAACTACCTCGAACTAAAGATGTACTTGTGAATGGTCATACGGTGAAAGTGAAGTTCTGTGATACATGCTTGCTATATCGACCGCCTCGTACTTCTCATTGTTCTATATGCAACAACTGTGTCCAGAGATTTGATCATCACTGCCCCTGGGTTGGCCAGTGCATCGGAAGACGAAACTATCGGTACTTCTTCATGTTTATTTCAACATCAACCATTTTGTGCCTATATGTCTTTGTGTTCTCTTGTATCAATCTTTCGCAGAAAGATTTTTGGGATGGAATCTCACATGATTATGTATCGGATTTTCTCATTATATACTGCTTCATTGCTGTCTGGTTTGTTGGTGGGCTCACAGCTTTCCATTTCTATCTCATTTGTACAAATCAGACAACTTACGAGAACTTCCGGTACCAATATGATAAAAAAGGGAACCCATACAATAAGGGATCACTAAGAAATATTGGAGAAACGCTTTGTTCCAGTATTCCTGCTTCAATGAATAATTTCCGATCGTTTGTACAACAGGATGAACATACGATGGTTGGGTGTTTGACTCCGAATCTTGCGGATGGGATTTTGACTCCAAAGGAGAAAATTGATGTTGAAATGGGATCTAGGCGTGCAGACGACGGTGGTTTTCCAATTCCCGAACTTCTGCGAAATTTTGATTTTGATAGTTTTGAGGATGACATGAAGTTTGAAGACGAGGAGGGACAACATTCATTTGATCCATTCTACAGTGTTGAGGAAGACGTAAAAGATTCGAGCCGAACATCTAATGCTACAGTTTTAAATTTCCATAGTATCGCAATCGAAGATTCAACGGAAGAGTCTGTTTGTAGCTCCCATGCTGGATTCGAAGTCACAGAATCTGATCAAAGGCTTGTTACTGTTGATGAAATAAATGCAACTAAAGCAACTGATGACAGAAATGACTCATGTTAA 1380 0.4029 MIRSRNSQIGSSPSGGGAHDMKPRRLYQVWRGGNKFLCGGRLVFGPDVASLFLTTFLIAAPAIAFCVKMYLKAKHEKANNGDHLFWCPVVIVGSVLTILDFLFLLLTSGRDPGIIPRNSTPPDYDDAFNIPTPSMEWINGSTPHLKLPRTKDVLVNGHTVKVKFCDTCLLYRPPRTSHCSICNNCVQRFDHHCPWVGQCIGRRNYRYFFMFISTSTILCLYVFVFSCINLSQKDFWDGISHDYVSDFLIIYCFIAVWFVGGLTAFHFYLICTNQTTYENFRYQYDKKGNPYNKGSLRNIGETLCSSIPASMNNFRSFVQQDEHTMVGCLTPNLADGILTPKEKIDVEMGSRRADDGGFPIPELLRNFDFDSFEDDMKFEDEEGQHSFDPFYSVEEDVKDSSRTSNATVLNFHSIAIEDSTEESVCSSHAGFEVTESDQRLVTVDEINATKATDDRNDSC* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2472 459 Pfam DHHC palmitoyltransferase 162 282 IPR001594 GO:0016409
Mtr7g2472 459 ProSiteProfiles DHHC domain profile. 163 213 - -
Mtr7g2472 459 PANTHER S-ACYLTRANSFERASE 21 362 - -
Mtr7g2472 459 MobiDBLite consensus disorder prediction 1 20 - -
Mtr7g2472 459 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 21 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2472 Mtr-Chr7 41186046 41191141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2472 162 305 Lipid Metabolism Gene Families AT4G22750 32.450 2.76e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2472 - - gmx:102668608 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2472 7 41186046 41191141 Mtr7g2472 7 41186046 41191141 ECH