Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2446 ATGGCCACCAACGAAAATCTTCCGCCTAATGTGATAAGGCAACTTGCCAAGGAGTTGAAAAATCTTGATGAAACCCCTCCCGAGGGCATTAAAGTTGTCGTGAATGACGATGATTTTTCAACAATTTTTGCTGACATTGAAGGCCCTGCTGCAACTCCTTATGAGAGTGGAGTTTTCCGCATGAAGTTGAAACTATCGCATGATTTTCCACACTCTCCTCCTAAAGGATATTTCTTGACCAAGATTTTCCATCCAAATATTGCCAACAGTGGAGAGATTTGTGTCAACGCGCTCAAAAAGGATTGGAATCCTAGCCTTGGGTTACGGCATATTCTCATCGTTGTTAGGTGTCTATTGATTGAACCGTTTCCAGAATCAGCTTTAAATGAACTGGCTGGTAAACTACTGCTTGAAAATTATGAGGAGTATGCTAGACATGCCAGGCTTTTAACCGGAATCCATGCAAAACCAAAGCCGAAATTCAAAAGTGGAGCTATAACCGAATCAACTACTGCTCTGAATGTTGATCAGACAAACACTTCGGTGCTTAATTCTGACATCAAAACCATGCCGTCAGGTGCTGCTTTGCCACCACTGTCATTGCCCTTAACCACTGGAGCAAGAGGAACTGGTCAGGATCAGGCAGTAGTGGGCGTTCTGACCGAGTCGTCTGCTAATGTTTCTTCTGCTGCCGCGGTAGTTTCTGCTGCTCATGCACCACAAAAGAGGGACATTGGAACTGCTAAAGCTCAGGCAGACAAGAAGAAGCTAGATGCTAGAAAGAAAAGTTTGAAAAGATTGTGA 804 0.4391 MATNENLPPNVIRQLAKELKNLDETPPEGIKVVVNDDDFSTIFADIEGPAATPYESGVFRMKLKLSHDFPHSPPKGYFLTKIFHPNIANSGEICVNALKKDWNPSLGLRHILIVVRCLLIEPFPESALNELAGKLLLENYEEYARHARLLTGIHAKPKPKFKSGAITESTTALNVDQTNTSVLNSDIKTMPSGAALPPLSLPLTTGARGTGQDQAVVGVLTESSANVSSAAAVVSAAHAPQKRDIGTAKAQADKKKLDARKKSLKRL* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2446 267 MobiDBLite consensus disorder prediction 235 267 - -
Mtr7g2446 267 Pfam Ubiquitin-conjugating enzyme 15 148 IPR000608 -
Mtr7g2446 267 Gene3D Ubiquitin Conjugating Enzyme 4 157 IPR016135 -
Mtr7g2446 267 CDD UBCc 12 151 IPR000608 -
Mtr7g2446 267 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 156 IPR000608 -
Mtr7g2446 267 SUPERFAMILY UBC-like 5 159 IPR016135 -
Mtr7g2446 267 Coils Coil 247 267 - -
Mtr7g2446 267 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 22-LIKE 4 261 - -
Mtr7g2446 267 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 83 98 IPR023313 -
Mtr7g2446 267 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 4 261 - -
Mtr7g2446 267 SMART ubc_7 13 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2446 Mtr-Chr7 40869794 40872641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2446 12 105 Miscellaneous Gene Families AT2G33770 28.125 1.34e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2446 K10583 - gmx:100801681 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2446 7 40869794 40872641 Mtr7g2446 7 40869794 40872641 ECH