Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2429 ATGGAATCAAGCGTTTTAGAAAGCATTGGCGTTGAGATAATCGGAGTAATGTCACCAGTTTCAATCTGCATGTTCCTCGTCGTTCTCCTCGTCTACACTCTCTCCACCACCTCCTCACCGGAAACCACCTTCACCACCGCCGCTAATCTCGTCTACGCTGAAAACCCCTCCGACACCACCGCACAAAAACTCGAAGGCGCACTTCTCAACGCCGTCGTTTTCATCATCCTCATCGCCATCGTCACCTTCCTTCTCGTCCTCCTTTACTACTACAACTGCACCGCCTTCCTCCGTAACTATGTCCGCTTCTCCGCCTTCTTCGTCCTCGCTACCATGGGTGGATCCATCTTCATCAACCTAATCGAACGCTTCTCAATTCCGTTAGATTCAATCACTTTTTTCATTTTTCTCTTCAATTTCACTATTGTTGGTGTGCTTTCGGTTTTCGCGGAAGCGATTCCGATTATTGTTCGTCAGTGTTATATGGTTTGTCTTGGGATTTTCGTTGCTGCGTGGTTTACGAAGCTTCCGGAATGGACCACGTGGACGCTTCTTGTTGCTCTTGCTCTTTATGATCTTGTTGCTGTTTTAGCTCCTGGTGGTCCTTTGAAGCTCCTCGTTGAATTGGCTTCGAGCCGGAATGAGGAGCTTCCTGCTTTGATTTATGAAGCTCGCCCTACCGTTGCTCCTAACAGCAGGGCCGCTGCTTTTGGGCTTTTCGTCGCCGGTGTTTCTGAAGCTCAGCCAACTCAATCGTCTTCGATTGAGCTTCAGGAACTTCAGGTGGTCCCCATAGTGAATATGAATGAACGTGATAATGATATTCATATTGAAGGAGGTGGTGGTGATGATTCTGTTGCGGGGGTTGAGGATTTTCGGAATGATGAAGGGGAAAGGTCACCATTGGTTGGAAATAATGGGAATCGCGAAGAAGAAAGGTCTCCACTTGTTGAGGTGATGGGGAATGAGAGGAGAGAACCCAGGGAAAGAGAGGAATTTGCTGAGAGAGGGATTAAGCTTGGACTTGGTGATTTTGTGTTCTACAGTGTTCTTGTGGGAAGAGCTGCAATGTATGATCTTATGACTGTTTATGCTTGTTACCTTGCCATTATATCTGGACTTGGATGCACTCTTATTTTGTTGTCGGTTTGTCGTCATGCTTTGCCGGCTCTTCCGATTTCGATTGCTTTGGGTGTGCTTTTCTATTTCTTGACTAGATTGTTGATGGAGCCTTTTATCGTTGGAACTGCTACGAATTTGATGATGTTTTGA 1272 0.4654 MESSVLESIGVEIIGVMSPVSICMFLVVLLVYTLSTTSSPETTFTTAANLVYAENPSDTTAQKLEGALLNAVVFIILIAIVTFLLVLLYYYNCTAFLRNYVRFSAFFVLATMGGSIFINLIERFSIPLDSITFFIFLFNFTIVGVLSVFAEAIPIIVRQCYMVCLGIFVAAWFTKLPEWTTWTLLVALALYDLVAVLAPGGPLKLLVELASSRNEELPALIYEARPTVAPNSRAAAFGLFVAGVSEAQPTQSSSIELQELQVVPIVNMNERDNDIHIEGGGGDDSVAGVEDFRNDEGERSPLVGNNGNREEERSPLVEVMGNERREPREREEFAERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRHALPALPISIALGVLFYFLTRLLMEPFIVGTATNLMMF* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2429 423 PANTHER PRESENILIN 1 423 - -
Mtr7g2429 423 Pfam Presenilin 10 413 IPR001108 GO:0004190|GO:0016021|GO:0016485
Mtr7g2429 423 PRINTS Presenilin family signature 17 27 IPR001108 GO:0004190|GO:0016021|GO:0016485
Mtr7g2429 423 PRINTS Presenilin family signature 175 182 IPR001108 GO:0004190|GO:0016021|GO:0016485
Mtr7g2429 423 PRINTS Presenilin family signature 192 209 IPR001108 GO:0004190|GO:0016021|GO:0016485
Mtr7g2429 423 SMART psh_8 65 409 IPR006639 GO:0004190|GO:0016021
Mtr7g2429 423 Gene3D Presenilin 317 414 IPR042524 -
Mtr7g2429 423 PANTHER PRESENILIN 1 423 IPR001108 GO:0004190|GO:0016021|GO:0016485
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2429 Mtr-Chr7 40725587 40727458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2429 1 423 Miscellaneous Gene Families AT1G08700 62.771 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2429 K04505 - gmx:100819461 538.11