Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2423 ATGGCGCTATCATCGTCATCTTCAGCATCATGTTCATGCTTTTCACCTTCTACAACAATTCTACCTCCTTCTCTTCCTTTCACTACTCAATTCCACCGTAACGTCCGTTTTCGGCGAACAATTGCCGCAACCGCCACCGTGTCCACTCCGTCACTCTTCTCTACCACCAGAGAAGGACTTGACGCAGTTAACATTGCCGAAGATGTCACTCAGTTGATTGGAAATACACCGATGATATATCTGAATAAAGTTACAGATGGATGTGTAGCAAATGTTGCTGCAAAACTTGAATCCATGGAACCTTGCAGAAGTGTCAAGGATAGAATTGGCTATAGCATGTTAGCTGATGCTGAAGAGAGTGGAGCGATTTCTCCAGGGAAGACTGTTTTAGTTGAACCTACAACTGGAAATACGGGACTTGGCCTTGCTTTTGTTGCCGCAACGAAGGGTTATAAACTAATAGTCACAATGCCTGCGTCTGTTAATATTGAGAGGAGAATCCTTTTACGCACATTTGGTGCAGAAGTTGTTTTGACGAATGCCGAGAAGGGGTTGAAAGGGGCTGTTGACAAAGCTGAAGAAATTGTCTATGGCACACCCAATGCTTACATGTTTCGGCAGTTTGATAACAGGAATAACACAAAGATCCACTTCGAAACTACAGGGCCAGAGATATGGGAGGATACAATGGGTAATGTTGATTTATTGGTTGCTGCTATTGGAACTGGCGGCACTATTACAGGAACTGGACAATATCTGAAATTGATGAACAAAAAAATAAAGGTGGTTGGGGTGGAACCTGCAGATAGAAGTATAATCTCAGGAGACAATCCAGGTTTCATACCAAGTATTTTAGATATCAAACTGCTTGATGAAGTTGTCAAGGTTACCAATGTTGAAGCTATTGAAATGGCAAGGAGATTAGCATTGGAAGAAGGATTACTGGTTGGGATTTCTTCAGGAGCTGCAGCAGCAGCTGCGATAACTTTAGCAAGACGGCCTGAAAATTCTGGAAAACTTATAACGGTTATTTTTCCTAGTTTTGGTGAGAGGTATCTTACTACTGCCCTCTTCAGTTCTATTTATGAAGAAGTTCAGAGAATGTAA 1107 0.421 MALSSSSSASCSCFSPSTTILPPSLPFTTQFHRNVRFRRTIAATATVSTPSLFSTTREGLDAVNIAEDVTQLIGNTPMIYLNKVTDGCVANVAAKLESMEPCRSVKDRIGYSMLADAEESGAISPGKTVLVEPTTGNTGLGLAFVAATKGYKLIVTMPASVNIERRILLRTFGAEVVLTNAEKGLKGAVDKAEEIVYGTPNAYMFRQFDNRNNTKIHFETTGPEIWEDTMGNVDLLVAAIGTGGTITGTGQYLKLMNKKIKVVGVEPADRSIISGDNPGFIPSILDIKLLDEVVKVTNVEAIEMARRLALEEGLLVGISSGAAAAAAITLARRPENSGKLITVIFPSFGERYLTTALFSSIYEEVQRM* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2423 368 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 95 113 IPR001216 GO:0006535
Mtr7g2423 368 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 65 361 IPR036052 -
Mtr7g2423 368 CDD CBS_like 74 354 - -
Mtr7g2423 368 TIGRFAM cysKM: cysteine synthase 70 358 IPR005856 GO:0004124|GO:0006535
Mtr7g2423 368 PANTHER S-SULFO-L-CYSTEINE SYNTHASE (O-ACETYL-L-SERINE-DEPENDENT), CHLOROPLASTIC 42 368 - -
Mtr7g2423 368 Gene3D - 71 353 IPR036052 -
Mtr7g2423 368 PANTHER CYSTATHIONINE BETA-SYNTHASE 42 368 - -
Mtr7g2423 368 TIGRFAM cysK: cysteine synthase A 70 358 IPR005859 GO:0004124|GO:0006535
Mtr7g2423 368 Gene3D - 107 209 IPR036052 -
Mtr7g2423 368 Pfam Pyridoxal-phosphate dependent enzyme 69 344 IPR001926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2423 Mtr-Chr7 40671645 40677019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2423 61 368 Miscellaneous Gene Families AT3G03630 80.519 6.09e-173 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2423 K22846 - gmx:100819100 555.444