Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2419 ATGTGCGGCGCCGTCGCCCCAAGGTTCATCTTCATCCTCCGCCACAATCTCCGTCTCCTCTCTCCCTCTTTCTCCTCTCATTTCCACCACCGCACTCTCTTTTCTTCATTCACTCGTTCTCCTTCTTCTTCTTCTCTCACACCAAAACTCAAACTTAAAGCCTCACACCACCACCAACAACAACAACACATTCACACCCAACCTTCACAATCTCCTCTCACTGGGACCCACCATCCATGGCCAGAGTTTTCCAGATTTCTCTCACACATCTCCTCCGCCGGCTACACTTCCCCCTCCGATGCTTTCTCTCCCACCGTAGAATTGTCGCAGGCTGAAGTCAGTGCTTGCTTGTCTTTCGCTCGAGATAGACCTAACCTTCTCAGGTTGCTTTCGATCAGAGACGTAGCAGTTGTGGTTCAACATGGTACTCCTTTTATGTTCTCGGACTCGCAGGATTCTGTTTCCAAGATGAAGTCTTTTCTATCCAACGGTGACTCCACTGCCTTGGACTCTGATAAAGCAAATATGGTTGATCTGATGAAATTTATGCTGAGTTACGCAAGTAGCTGCTTGGTCTCTTCAGAAATGAACAATCTTTATAACAGAAATCTTGTTGAATCCTCTGTCAGAAACCTATTTGGTGAACTTTTCAAGCTGAGTTATAGCACACCTGGTCCTAACTCTTTTGATTCAGTGCAAAATCAAATGCCTGGTGGTAGATTTGAGCATACAATGCCTCCCGGACAAAACATTGAAATGAAAAGGGGTGATTGGATTTGCCCAAGGTGTAATTTCATGAATTTTGCAAGAAATATGAAATGTCTTGAATGTGAAGAAGCAAGGCCAAAAAGGCAACTGACTGGAGGAGAATGGGAATGTCCTCAGTGTGATTTTCATAATTATGGGAGGAATGTAGCTTGCTTACGGTGTGATTGCAAGCGGCCTGGACAAATATCTTTGGGTTCCATCAATACCACATCACATCCAGGGTATGGAAATGTAAACCATTCTAATACTTCAGATATTGATGCTAGGTTGGTGGCTAATGAAGAGAAGGCACGACGTTGGTTTAACAAGGTTTCTCAACTAGACAGCAACTCTGATATTAACAGTGTGATAGATGATGAAGATTTTCCGGAAATAATGCCGTTAAGGAAAGGAGTTAATAGATTTGTTGTAAGCACAAGGAAAACTCCACTGGAGAGGAGGTTGACCAATGCTCAATACAAGAGAAGCTTGGGAAATAACGACGCTCCCGAAGTTAAGGACTATAAAACTGGGGAGTCAGCCAAGTCTCGTGATACTCTGGACGACATTCTAGGTCGTTCAACTGGCCCTCCTCGATCTGACTACAAAAACATGGGTGCTGAGCAAAGTTTCAGTGGAGAAAGACAACCGTCAATTGCTAGCAATACATCACATTTCCAAGATGTGAAAGGGAACAACACTAATACCCTTTCCCCTTTTCCATCATATGCCAGTTCCGGTGACACCGACAGTACACAACTTTCTACTAACTCTTCAAGTGAAAACGTCATCAAGGACAAAGAGAGAGAGCAAGCTGAAAAATCTGATAGATGGTTTAGAAAGATTGCGGAGCTGAATGATGTTCCAGATATAACAAGTGCAATATCCGATGATGATTTCCCTGAAATAATGCCAATGCGTAAAGGAGAAAATCGATTTGTTTTTAGCAAGAAAAAGGATCGGTCCTTGACAACACCAGCATATAAGAGACGTTTGGCCATGGAGCAATCTGGCAATACTAACTTTGTCCCCTTAGTACCCTTTCCCCCAGATTACTTTGCCAAAAAGGAAAAACCACAGGCAGATGGAACAGATTCAACAGACAGGTCCAATGTTGAATCATCCTCAGTATCTGAAGGGACTGAGATGTCAGGTGATGCTACAGCTAGACCTGAACAGAGTCCAGGACCTTCTTCTGATCAGATCTCAAGTAAAAACAATCGTATTGGTTCTACTTATGCGGCTTCAAGCAGTGGAAATTCAAGTCAGGATTTTAAGAGACGTTTGGCCATGGAGCAATCTGGCAATACTAACTTTGTCCCCTTAGTGCCCTTTCCCCCAGATTACTTTGCCAAAAAGGAAAAACCACAGGCAGATGGAAATGTTGAATCATCCGCAGTATCTGAAGGGACTGAGATGTCAGGTGATGCTACAGCTAGACCTGAACAGAGTCCAGGACCTTCTTCTGATCAGATCTCAAGTAAAAACAATCGTATTGGTTCTACTTATGCGGCTTCAAGCAGTGGAGATTCAAGTCAGGATTTTAAGAGACGTTTGGCCATGGAGCAATCTGGCAATACTAACTTTGTCCCCTTAGTACCCTTTCCCCCAGATTACTTTGCCAAAAAGGAAAAACCACAGGCAGATGGAACAGATTCAACAGACAGGTCCAATGTTGAATCATCCTCAGTATCTGAAGGGACTGAGATGTCAGGTGATGCTACAGCTAGACCTGAACAGAGTCCAGGACCTTCTTCTGATCAGATCTCAAGTAAAAACAATCGTATTGGTTCTACTTATGCGGCTTCAAGCAGTGGAGATTCAAGTCAGGATTTTAAGAGACGTTTGGCCATGGAGCAATCTGGCAATACTAACTTTGTCCCCTTAGTACCCTTTCCCCCAGATTACTTTGCCAAAAAGGAAAAACCACAGGCAGATGGAACAGATTCAACAGACAGGTCCAATGTTGAATCATCCTCAGTATCTGAAGGGACTGAGATGTCAGGTGATGCTACAGCTAGACCTGAACAGAGTCCAGGACCTTCTTCTGATCAGATCTCAAGTAAAAACAATCGTATTGGTTCTACTTATGCGGCTTCAAGCAGTGGAAATTCAAGTCAGGATTTTAAGAGACGTTTGGCCATGGAGCAATCTGGCAATACTAACTTTGTCCCCTTAGTACCCTTTCCCCCAGATTACTTTGCCAAAAAGGAAAAACCACAGGCAGATGGAACAGATTCAACAGACAGGTCCAATGTTGAATCATCCTCAGTATCTGAAGGGACTGAGATGTCAGGTGATGCTACAGCTAGACCTGAACAGAGTCCAGGACCTTCTTCTGATCAGATCTCAAGTAAAAACAATCGTATTGGTTCTACTTATGCTGCTTCAAGCAGTGGAAATTCAAGTCAGGATTTTAATCAAGATCATGTGCCAAATCTGACAGAGAGTTCATCCACAGATTCAGCAGCTGAGAACCAGAGTGTCGGAACAGAATGGTCAGGGAAAAGTTTAGAGGGATCAGCGGTAAGGGAACCGGATCCTTTGGATATGTCTGAGGAGGCAAAGGCAGAGAGGTGGTTCCGTCGTGTTGCCCAAATTAAGGATATTTCTGAGCTCAGTCAGATTCCAGATGAAGATTTTCCTTCAATAATGCCTATGCGTAAAGGGGTGAACAGATTCGTTGTGAGCAAGCGGAAAACACCACTGGAAAGGAGATTGACATCTCAGCAGTACCGAAGAAATCTTCCAGCTGTGAGCTCAGATCCTGTTAAGAGAGAAAATGAAGGTAGCTGA 3543 0.438 MCGAVAPRFIFILRHNLRLLSPSFSSHFHHRTLFSSFTRSPSSSSLTPKLKLKASHHHQQQQHIHTQPSQSPLTGTHHPWPEFSRFLSHISSAGYTSPSDAFSPTVELSQAEVSACLSFARDRPNLLRLLSIRDVAVVVQHGTPFMFSDSQDSVSKMKSFLSNGDSTALDSDKANMVDLMKFMLSYASSCLVSSEMNNLYNRNLVESSVRNLFGELFKLSYSTPGPNSFDSVQNQMPGGRFEHTMPPGQNIEMKRGDWICPRCNFMNFARNMKCLECEEARPKRQLTGGEWECPQCDFHNYGRNVACLRCDCKRPGQISLGSINTTSHPGYGNVNHSNTSDIDARLVANEEKARRWFNKVSQLDSNSDINSVIDDEDFPEIMPLRKGVNRFVVSTRKTPLERRLTNAQYKRSLGNNDAPEVKDYKTGESAKSRDTLDDILGRSTGPPRSDYKNMGAEQSFSGERQPSIASNTSHFQDVKGNNTNTLSPFPSYASSGDTDSTQLSTNSSSENVIKDKEREQAEKSDRWFRKIAELNDVPDITSAISDDDFPEIMPMRKGENRFVFSKKKDRSLTTPAYKRRLAMEQSGNTNFVPLVPFPPDYFAKKEKPQADGTDSTDRSNVESSSVSEGTEMSGDATARPEQSPGPSSDQISSKNNRIGSTYAASSSGNSSQDFKRRLAMEQSGNTNFVPLVPFPPDYFAKKEKPQADGNVESSAVSEGTEMSGDATARPEQSPGPSSDQISSKNNRIGSTYAASSSGDSSQDFKRRLAMEQSGNTNFVPLVPFPPDYFAKKEKPQADGTDSTDRSNVESSSVSEGTEMSGDATARPEQSPGPSSDQISSKNNRIGSTYAASSSGDSSQDFKRRLAMEQSGNTNFVPLVPFPPDYFAKKEKPQADGTDSTDRSNVESSSVSEGTEMSGDATARPEQSPGPSSDQISSKNNRIGSTYAASSSGNSSQDFKRRLAMEQSGNTNFVPLVPFPPDYFAKKEKPQADGTDSTDRSNVESSSVSEGTEMSGDATARPEQSPGPSSDQISSKNNRIGSTYAASSSGNSSQDFNQDHVPNLTESSSTDSAAENQSVGTEWSGKSLEGSAVREPDPLDMSEEAKAERWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQQYRRNLPAVSSDPVKRENEGS* 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2419 1180 MobiDBLite consensus disorder prediction 1151 1180 - -
Mtr7g2419 1180 MobiDBLite consensus disorder prediction 589 1101 - -
Mtr7g2419 1180 MobiDBLite consensus disorder prediction 409 523 - -
Mtr7g2419 1180 ProSitePatterns Zinc finger RanBP2-type signature. 291 310 IPR001876 -
Mtr7g2419 1180 MobiDBLite consensus disorder prediction 416 438 - -
Mtr7g2419 1180 MobiDBLite consensus disorder prediction 61 75 - -
Mtr7g2419 1180 MobiDBLite consensus disorder prediction 454 510 - -
Mtr7g2419 1180 MobiDBLite consensus disorder prediction 36 75 - -
Mtr7g2419 1180 ProSiteProfiles Zinc finger RanBP2 type profile. 254 283 IPR001876 -
Mtr7g2419 1180 MobiDBLite consensus disorder prediction 36 50 - -
Mtr7g2419 1180 PANTHER ZINC FINGER PROTEIN VAR3, CHLOROPLASTIC 672 724 - -
Mtr7g2419 1180 PANTHER ZINC FINGER PROTEIN VAR3, CHLOROPLASTIC 5 628 - -
Mtr7g2419 1180 PANTHER ZINC FINGER PROTEIN VAR3, CHLOROPLASTIC 762 815 - -
Mtr7g2419 1180 PANTHER ZINC FINGER PROTEIN VAR3, CHLOROPLASTIC 956 1179 - -
Mtr7g2419 1180 PANTHER ZINC FINGER PROTEIN VAR3, CHLOROPLASTIC 859 912 - -
Mtr7g2419 1180 MobiDBLite consensus disorder prediction 710 779 - -
Mtr7g2419 1180 Gene3D - 247 284 - -
Mtr7g2419 1180 Gene3D - 285 317 - -
Mtr7g2419 1180 PANTHER ZINC FINGER PROTEIN 762 815 - -
Mtr7g2419 1180 PANTHER ZINC FINGER PROTEIN 672 724 - -
Mtr7g2419 1180 PANTHER ZINC FINGER PROTEIN 859 912 - -
Mtr7g2419 1180 PANTHER ZINC FINGER PROTEIN 956 1179 - -
Mtr7g2419 1180 PANTHER ZINC FINGER PROTEIN 5 628 - -
Mtr7g2419 1180 Pfam Zn-finger in Ran binding protein and others 289 315 IPR001876 -
Mtr7g2419 1180 Pfam Zn-finger in Ran binding protein and others 255 282 IPR001876 -
Mtr7g2419 1180 MobiDBLite consensus disorder prediction 898 973 - -
Mtr7g2419 1180 ProSitePatterns Zinc finger RanBP2-type signature. 258 277 IPR001876 -
Mtr7g2419 1180 SUPERFAMILY Ran binding protein zinc finger-like 248 283 IPR036443 -
Mtr7g2419 1180 SMART zf_4 289 313 IPR001876 -
Mtr7g2419 1180 SMART zf_4 256 280 IPR001876 -
Mtr7g2419 1180 ProSiteProfiles Zinc finger RanBP2 type profile. 287 316 IPR001876 -
Mtr7g2419 1180 MobiDBLite consensus disorder prediction 995 1084 - -
Mtr7g2419 1180 MobiDBLite consensus disorder prediction 614 689 - -
Mtr7g2419 1180 MobiDBLite consensus disorder prediction 801 876 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2419 Mtr-Chr7 40634604 40641689 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2419 78 320 EF-hand Containing Proteins AT1G55040 32.660 2.23e-39 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2419 - - mtr:MTR_7g087047 1827.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2419 7 40634604 40641689 Mtr7g2419 7 40634604 40641689 ECH