Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2407 ATGGGCATCAAAATATTCATGTTTACCTTCATGGTAACCTCAATATTATTCTTTTTTCTCTTCATCCCAACAAGACTAACCCTTCAAATCTCAACCTTGAAACCTAGTGCTATGGACTACTTCAATGTCCTAAGAACCAACATAACATACCCAATTACTTTTGCTTACTTGATCTCTGCATCCAAAGGTGATACTTTGAAGCTCAAAAGGTTGCTTAAAGTGTTGTATCATCCAAATAACTACTACTTAATTCACATGGATTATGGTGCTCCAGATGCAGAACATAAAGATGTGGCAGAATATGTGGCTAATGATCCTGTTTTTAGTCAAGTTGGGAATGTTTGGATTGTTGGGAAGCCTAATTTGGTAACTTATAGAGGACCAACTATGCTTGCAACTACTCTTCATGCTATGGCAATGCTTCTTAAGACATGTCATTGGGATTGGTTTATTAATCTTAGTGCTTCTGATTATCCATTGGTTACACAAGATGATCTGATCCAAGTTTTTTCTGAGGTGCCAAGGGATATTAATTTCATACAACATAGTAGTCGTTTGGGTTGGAAATTCAATAAGAGAGGGAAGCCAATGATTATAGATCCGGGACTTTATAGCCTCAATAAATCAGATATTTGGTGGATCATTAAGCAAAGGAATTTGCCAACATCTTTCAAACTATACACAGGTTCAGCATGGACAATAGTATCAAGATCATTTTCTGAGTATTGCATCATGGGATGGGAAAATCTGCCAAGGACTCTACTCCTCTACTACACTAACTTTGTCTCATCACCAGAAGGATATTTCCAAACAGTAATATGCAACTCACAGGAGTACAAGAACACCACTGCCAACCATGATCTTCACTACATTACTTGGGACAATCCTCCAAAACAACACCCTAGGTCTCTAGGACTTAAAGATTATAGGAAAATGGTTCTGAGTAGCCGTCCTTTCGCTAGAAAATTCAAGAGAAATAATATTGTTCTTGATAAAATTGATAGAGATCTTCTGAAGAGGTATAAGGGGGGATTTTCTTTTGGAGGGTGGTGTTCTCAGGGTGGAAGGAACAAAGCATGTTCAGGTTTGAGAGCTGAGAATTATGGTTTGCTTAAACCTGGTCCTGGCTCAAGAAGGCTCAAGAATTTGTTAAACAAAATTCTCATGGATAAATTTTTTCGCCAAATGCAGTGTAGGTAA 1200 0.3767 MGIKIFMFTFMVTSILFFFLFIPTRLTLQISTLKPSAMDYFNVLRTNITYPITFAYLISASKGDTLKLKRLLKVLYHPNNYYLIHMDYGAPDAEHKDVAEYVANDPVFSQVGNVWIVGKPNLVTYRGPTMLATTLHAMAMLLKTCHWDWFINLSASDYPLVTQDDLIQVFSEVPRDINFIQHSSRLGWKFNKRGKPMIIDPGLYSLNKSDIWWIIKQRNLPTSFKLYTGSAWTIVSRSFSEYCIMGWENLPRTLLLYYTNFVSSPEGYFQTVICNSQEYKNTTANHDLHYITWDNPPKQHPRSLGLKDYRKMVLSSRPFARKFKRNNIVLDKIDRDLLKRYKGGFSFGGWCSQGGRNKACSGLRAENYGLLKPGPGSRRLKNLLNKILMDKFFRQMQCR* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2407 399 Pfam Core-2/I-Branching enzyme 54 312 IPR003406 GO:0016020|GO:0016757
Mtr7g2407 399 PANTHER GLYCOSYLTRANSFERASE 1 398 IPR044610 GO:0015020
Mtr7g2407 399 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2407 Mtr-Chr7 40481329 40485443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2407 54 399 Glycosyltransferase AT4G27480 58.501 6.83e-153 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2407 - - gmx:100818137 695.656