Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2406 ATGGCCACCTTGAATAACCATCATAACAGAAACACACAACCACAGGTTCAACAGCAAACTCTTCACATTGAGGCACAAGATTCAAGCTTTGTCAACACACCAACAGTGGCAGGAAAAACAGTCAGAAAGCTATTTCAGATTCTTTTCTACTTGTATCTGGTTCTGATTTCAATCTTGGTGATTTTCATCACCGTCTATGGTCTTGTCTTAGACTATTCAACCCACCATTTCCACCCTGAGAAATGGTACCCTCCACTTCTAGCATCAACAGTATGTGGAGGAATTCTTGGTTTGATGTGGCAATGGATCATTGCAAGCCACCCGGAAAAGGCGCTCAGGGCAGCATTTTGGTTGAGTCCATTGTTAACGTGTGCAATGGGAATTCTGTTTGTGTTAATTGGTTCTGCATTGAGTTTGGTAGTTGGTATAGTTTCTTTGATTTCTGCAGTGATTCAATCCCTCTATGGTTGTTGGGTCGGTAAGCGATTCGTCTACGCCACTGAAATCTTATTGGTTTCAAAAGCTTCTCCTCCTGCTAAAACCAAGCGCTTAGCATGTTCTTTAACTGTCATCGGTATCATTTACTGCTGTTTTCTTGTGTCTGGAATTGGCGGCGCAAAAGCTATCCAAAACAGAACCAAACTAGCAGACATTTGCATCTTAGTGATCATACTGAGCCTTGGATGGACTATGCAGGTTCTAAAGAATGCAATACAAGTCACAGTTTCGAGGGTTAAGTATATGCATTTTTCTGGAGGAGGTGACATAGACACCAGAGTTGCATTTTGTGACACAGTCAAGCACTTAATTGGAAGTGTTTGTATAGGCTCCATCCTAGTCCCTACCATTGGACTCTTCCGAGGCTTTGCACGATCAACGAGTCTGATTGGAGGTGAAACAAATGAGTGCATGTTTTCTTGTGTTAGTTGTTCGATGGGAATTGCGTCGCTTCTTGTGACAAAGGGGAATAGATGGGGTTTTGTGCATGTTGGAGTTTATAACAAAGGGTTTGTGCAAGCATCTTCTGATACTTGGGACATGTTCATTAGAGTTGGATTAGAGGAATTGATAGATTTGGATCTCACTGGTGCATTCTGTTTTCTTAGTGGTGTTGCAGTAGGTGCAATTTGTAGTCTTGTGAGTGGAATCTGGAGTCTTATACTGTACAAGAACTATGCCATGGAATTATCCATTTATGCTTTCCTCATTGGCTATTTCCTGTGTAGGTTGGCTATTGCATGGCCACAAGCATGCGTTTCGGCTTACTATGTGGCATACGCAGAGAACCCACAGAGCACTCAATTTGACTCAATTATTCCAGTACGTTTGGAGCGGCTTCACAGATCTCAAGCTATACAAAGATCTTCCTGA 1371 0.423 MATLNNHHNRNTQPQVQQQTLHIEAQDSSFVNTPTVAGKTVRKLFQILFYLYLVLISILVIFITVYGLVLDYSTHHFHPEKWYPPLLASTVCGGILGLMWQWIIASHPEKALRAAFWLSPLLTCAMGILFVLIGSALSLVVGIVSLISAVIQSLYGCWVGKRFVYATEILLVSKASPPAKTKRLACSLTVIGIIYCCFLVSGIGGAKAIQNRTKLADICILVIILSLGWTMQVLKNAIQVTVSRVKYMHFSGGGDIDTRVAFCDTVKHLIGSVCIGSILVPTIGLFRGFARSTSLIGGETNECMFSCVSCSMGIASLLVTKGNRWGFVHVGVYNKGFVQASSDTWDMFIRVGLEELIDLDLTGAFCFLSGVAVGAICSLVSGIWSLILYKNYAMELSIYAFLIGYFLCRLAIAWPQACVSAYYVAYAENPQSTQFDSIIPVRLERLHRSQAIQRSS* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2406 456 PANTHER F20H23.27 PROTEIN-RELATED 15 450 - -
Mtr7g2406 456 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 15 450 IPR007603 GO:0022857|GO:0055085
Mtr7g2406 456 Pfam Plasma-membrane choline transporter 128 430 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2406 Mtr-Chr7 40472884 40475695 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2406 - - lja:Lj1g3v3981460.1 669.463