Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2396 ATGAGCATTCTGTCATCACGAACAAGTTCCCGTTCCGTAACAGAAACGGTAAACGGTTCACACAAGTTTGTAATCAAAGGCTACTCACTTGCAAAAGGAATGGGAGTTGGTAAACACATAGCCAGCGAGACTTTCACCGTCGGCGGTTACCAATGGGCAATTTACTTCTACCCCGACGGTAAAAACCCAGAAGATAATTCTGCTTATGTTTCTGTTTTCATTGCTCTCGCTTCTGAAGGTACCGATGTTAGAGCTCTTTTTGAACTCACTTTGCTTGATCAGAGTCCTAATTGCAAACATAAGGTTCATAGTCATTTTGATCGCTCTCTTGAGAGTGGTCCTTATACTCTTAAGTATCGCGGCAGCATGTGGGGGTATAAGCGGTTTTTCAAACGTGCTCAACTTGAGGCGTCGTCCTTCCTTAAGGATGACTGCTTGAAGATAAACTGCACTGTTGGTGTGGTTGTGTCGTCCATTGATTGTTCTAAATTGACCACCATACATGTTCCTGAATCTGACATTGGATCGCATTTTGGCATGCTGTTAGAGAATGAGGAAGGATCTGATGTTACTTTCTCTGTTGGTGGAGAAAGATTTCATGCACATAAACTTGTTATGGCAGCTCGGTCAACTGCATTTGAAACCGAGTTTTTCAATAGTATGGAGGAAGATGACCGTGATGTAGTTGTTACGGACATGGAACCTAAGGTTTTCAAGGCTTTGCTTCATTTTATTTATCGAGACACTCTTATAGAAGATGAAGAGTTCTTCATGTCAAGTTCATCGTTCCTGCCTTCAATATCTGAAACATTTGCAGCAAAATTGTTAGCTGCTGCGGAAAAGTATGATTTGCCTAGACTTAAGCTGATGTGTGAGTCTGTACTTTGCAAAGATATATCTATAGATTCTGTTGCCTATATTCTGGCTCTTGCTGATCGCTATCATGCCACGGAGTTAAAGGCCATCTGTCTACAATTTTCCGCTGAAAACCTTGTCGGTTTTGTCTGTGTCAAGAGTCAAGACCTGTGCTTAGGTCTACTTCAAGGCATGTAA 1053 0.4188 MSILSSRTSSRSVTETVNGSHKFVIKGYSLAKGMGVGKHIASETFTVGGYQWAIYFYPDGKNPEDNSAYVSVFIALASEGTDVRALFELTLLDQSPNCKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFKRAQLEASSFLKDDCLKINCTVGVVVSSIDCSKLTTIHVPESDIGSHFGMLLENEEGSDVTFSVGGERFHAHKLVMAARSTAFETEFFNSMEEDDRDVVVTDMEPKVFKALLHFIYRDTLIEDEEFFMSSSSFLPSISETFAAKLLAAAEKYDLPRLKLMCESVLCKDISIDSVAYILALADRYHATELKAICLQFSAENLVGFVCVKSQDLCLGLLQGM* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2396 350 ProSiteProfiles BTB domain profile. 188 254 IPR000210 GO:0005515
Mtr7g2396 350 CDD MATH 19 152 IPR002083 GO:0005515
Mtr7g2396 350 Pfam BTB/POZ domain 180 297 IPR000210 GO:0005515
Mtr7g2396 350 SUPERFAMILY TRAF domain-like 15 154 - -
Mtr7g2396 350 Gene3D Potassium Channel Kv1.1; Chain A 156 329 IPR011333 -
Mtr7g2396 350 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 6 333 IPR045005 GO:0016567
Mtr7g2396 350 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 4-LIKE 6 333 - -
Mtr7g2396 350 SMART math_3 23 135 IPR002083 GO:0005515
Mtr7g2396 350 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 17 155 IPR008974 GO:0005515
Mtr7g2396 350 SMART BTB_4 188 299 IPR000210 GO:0005515
Mtr7g2396 350 CDD BTB_POZ_BPM_plant 174 296 - -
Mtr7g2396 350 SUPERFAMILY POZ domain 165 299 IPR011333 -
Mtr7g2396 350 ProSiteProfiles MATH/TRAF domain profile. 18 152 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2396 Mtr-Chr7 40342677 40350464 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2396 K10523 - gmx:100818306 604.749