Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2390 ATGGAAGATTTCAACCACCACCTCTCCGCCCTCTCCGCCTCCCTCCAATCCATCCCCACCTCCGACTCCTTCCGTTTCCACTACAACCTCCCCGAATTCCGTCACCTCATCGACCAACTCACCCAAAAATCCCAATCCATGCTCAACCAAATCGGCTCTTCCGACCACATTTGGGGCCATAACTCCTCCTTCCCCGTCGACGTCGACGACGGTTACGAATGGATGGTTAATGCAAACGACGACGTTCTGGAACTCGTCGACGAAGTAGTCGACGAGTTTCATAGGGTTCTTATGGAGCAAGATATGGAAAAAGGGGAAGATGGGTTTTTTAAGATTAAGAAAGAGAGGAAAGGGTTGATTCTTTGGGGTGATGATCATGGGAATGAAACCAAGAAGAAAGTTTCGTTTCATGTTCATACTCTTAGGAAACCTCAGTATCATTATAATCTTGCTGTTGATAATTCCAATCAGCCTTTTGAACATGTTTGGTTGGAGAAGGAGAAGACTGAAGATGGTGAAAGGTTTATACATCCTTTGGAGTATTACTCTGTTTTAGATTTTGTTGATAAAAATAGTATCGAGAGTCTTGTACCAGTAAAGCCTCCCCCGCTAGAATTCACACCTTTCAAGCTTGTGGAGGATGTCAAAGGGTTGAAGGAGTTGGCTGCTAAGCTGAGCTTGGTTGATGAATTTGCGGTGGATTTGGAACATAATCAATATCGGTCTTTTCAAGGTTTGACTTGCTTGATGCAAATATCAACTCGGACTGAAGATTTTATCGTCGATACTCTGAAACTCCGTGATCATGTCGGGAAACACCTGCGGGATGTTTTCATGGACCCTACCAAGAAAAAGGTCTTGCATGGTGCAGATCGAGACATTGTGTGGTTGCAACGGGACTTTGGCATTTACATCTGTAATATGTTTGACACTGGCCAGGCTTCAAGAGTGTTAAAAATGGAGAGATATAGTTTGCAACATCTTTTGCAACACTTTTGTGGGGTTACTGCAAACAAAGAGTACCAGAATGCAGACTGGAGAGCACGCCCTCTTCCTGATGTGATGATAAAGTATGGAAGAGAAGATACACACTATCTGCTTTATATATATGATTTGATGAGGATCAAGCTATTTGAACTGTCTAAGGAGTCTGAAAGTCCAGATGATCCTCTGTTGGAGGTTTACCAGCGGAGTTATAATGTCTGCATGCAGCTGTATGAGAAAGATCTTTTGACAGAAAACTCCTTCCTTAATATAAAGGGATTGCGAGGGGCTGGTTTTAACGGTCAGCAGCTTGCTGTTGTTTCAGTATTGGTATTGGTACGATACCGGGGCTTTATGAATGGCGTGATGTTCTTGCGCGGGCAGAGGATGAGAGTACTGGCTAAGCATATGCCCGTCACTGCAAGCAATCTACGGCGATTAATAGCAGAGAGGTCAAGACTACCATATGTTGAGCGCAATCATGATATCGTTGTTAACATTGTCAGACATTCTATGGGAAAGGCTGCTGCGTTTGAAGAAGCTGCACTTCGTTTGAAAGAAGAGCATGCTGCCTTTGTAGAAGCTGCTGCACTTCGTTTGAAAGAAGAACATGCTGCGAGTGTGTCAAATGTAGCATCTGTTGAGGATGGAACTGAAGCTCCCCAATCTCCTTCCTTGAGCTTAAAGGATGAATGTGCAGCAAATGGAAGCATTGGAATTGAAAATGCCACCTGTGTTAATATCTCTGAGAAGTCGTTGTTTTCTTCTGACCCTAATTCCTCTGCAGTGAAGGAAAATGGAACAAATGTTCAGGCGCTAAAAATGCCTACTGTTGCTTGCGATGCAACGCTGCTGGGAAATTCAACTTCAGAAGGGAATGGTTATCCTGACAAAAAGGGAAAGAAAAAGATCAAGGTAGAACAGAATGTATCATCAATCAATCTTCCAAGCCATTCATTTTTGGGCAATAATGAGAAGTCAAAACTAGCTGTAAGTGTAGCTTCAGTTTCCACATCTACCCTGGATGCAAACATGACAGTAGACTTGGATTCAGACTCGGAGGATATGATGCAGAGTAACCTATGA 2070 0.4343 MEDFNHHLSALSASLQSIPTSDSFRFHYNLPEFRHLIDQLTQKSQSMLNQIGSSDHIWGHNSSFPVDVDDGYEWMVNANDDVLELVDEVVDEFHRVLMEQDMEKGEDGFFKIKKERKGLILWGDDHGNETKKKVSFHVHTLRKPQYHYNLAVDNSNQPFEHVWLEKEKTEDGERFIHPLEYYSVLDFVDKNSIESLVPVKPPPLEFTPFKLVEDVKGLKELAAKLSLVDEFAVDLEHNQYRSFQGLTCLMQISTRTEDFIVDTLKLRDHVGKHLRDVFMDPTKKKVLHGADRDIVWLQRDFGIYICNMFDTGQASRVLKMERYSLQHLLQHFCGVTANKEYQNADWRARPLPDVMIKYGREDTHYLLYIYDLMRIKLFELSKESESPDDPLLEVYQRSYNVCMQLYEKDLLTENSFLNIKGLRGAGFNGQQLAVVSVLVLVRYRGFMNGVMFLRGQRMRVLAKHMPVTASNLRRLIAERSRLPYVERNHDIVVNIVRHSMGKAAAFEEAALRLKEEHAAFVEAAALRLKEEHAASVSNVASVEDGTEAPQSPSLSLKDECAANGSIGIENATCVNISEKSLFSSDPNSSAVKENGTNVQALKMPTVACDATLLGNSTSEGNGYPDKKGKKKIKVEQNVSSINLPSHSFLGNNEKSKLAVSVASVSTSTLDANMTVDLDSDSEDMMQSNL* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2390 689 CDD Rrp6p_like_exo 207 397 - -
Mtr7g2390 689 Pfam PMC2NT (NUC016) domain 16 94 IPR012588 GO:0000176|GO:0006396
Mtr7g2390 689 MobiDBLite consensus disorder prediction 537 556 - -
Mtr7g2390 689 MobiDBLite consensus disorder prediction 539 556 - -
Mtr7g2390 689 Pfam 3'-5' exonuclease 211 374 IPR002562 GO:0003676|GO:0006139|GO:0008408
Mtr7g2390 689 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 518 677 IPR045092 GO:0000175|GO:0000467
Mtr7g2390 689 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 1 521 IPR045092 GO:0000175|GO:0000467
Mtr7g2390 689 PANTHER 3'-5' EXONUCLEASE 518 677 - -
Mtr7g2390 689 PANTHER 3'-5' EXONUCLEASE 1 521 - -
Mtr7g2390 689 SUPERFAMILY Ribonuclease H-like 142 409 IPR012337 -
Mtr7g2390 689 Gene3D - 132 419 IPR036397 GO:0003676
Mtr7g2390 689 SMART 35exoneu6 209 378 IPR002562 GO:0003676|GO:0006139|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2390 Mtr-Chr7 40277675 40288169 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2390 K12591 - gmx:100804872 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2390 7 40277675 40288169 Mtr7g2390 7 40277675 40288169 ECH