Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2374 ATGGAACACAAACATGCACATAACCGGTCTTATGAAGATTTTGATCCTGTTTTTAAGTGGCGTAGAGAACAAGACCGTGACACCATTGAGCTTCATCTTCCAGGTTTTAAGAGAGAGCAAATACGAATTCAAATCAACCATCTTGGTTTTTTGGTGATAAGTGGAGAGCGTCCATTTGATGGAACTAAATGGAAACGTTTCAAGAAAGAATTTGAACTTCCAAAATATTGCAATGAAGATGCTATTCGTGGCAATTTCATGCAGAACATTCTTTCAGTAGTACTGCCAAAAAAAGTTGATCTAATACCTCAAGAGGAACAAGAAGAAGAAGAAAAAATTCCAGAACTTGAAGATTTGGATAAATATCAAGAGAAAAATACATATAAGAGTTTGGGATTTGGAGGAAGAGATAGAGAAGAAGAGATTGGAACACTATCAGAATATACTTACAGAACAGACAACAAGTTTGGTGAAAATGATGTAGAAACTACTAGAGAGGTTGCTCTTAAATTCATGGTTGTGATAATTGTTGTAATGGTTATTGTAAATTATCTTGTGGATATGAGCAAAACTGTCATGGCTCAAGGTCAATCATATTTTCAAAATTAG 609 0.3448 MEHKHAHNRSYEDFDPVFKWRREQDRDTIELHLPGFKREQIRIQINHLGFLVISGERPFDGTKWKRFKKEFELPKYCNEDAIRGNFMQNILSVVLPKKVDLIPQEEQEEEEKIPELEDLDKYQEKNTYKSLGFGGRDREEEIGTLSEYTYRTDNKFGENDVETTREVALKFMVVIIVVMVIVNYLVDMSKTVMAQGQSYFQN* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2374 202 Gene3D - 1 100 IPR008978 -
Mtr7g2374 202 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 8 112 IPR002068 -
Mtr7g2374 202 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 1 200 - -
Mtr7g2374 202 PANTHER HEAT SHOCK PROTEIN 26 1 200 IPR045045 -
Mtr7g2374 202 SUPERFAMILY HSP20-like chaperones 8 100 IPR008978 -
Mtr7g2374 202 CDD ACD_sHsps-like 20 97 - -
Mtr7g2374 202 Pfam Hsp20/alpha crystallin family 20 101 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2374 Mtr-Chr7 40171940 40172996 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2374 - - gmx:100801505 207.608