Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2369 ATGGAAGTAGCTAGTTGTCCACATGCACAGAAGCAGAATTTGCAGAAAACAGGTCGCAAAGTTTGTTCTGGATCTCCAAAAGATCTGTGGCTTGTTGTGCGTGAAGGATCTCTGAATGACGTAGAGTCGGCATTGTCATCACTAAAAAAGAGTGGGGGCAATATCAATGTGAGGAACACCTACGGGCTGACTCCTCTTCATGTTGCAGCTTGGAGAAACCACATTCCCATTGTAAGGAGGCTTCTTGCGGCTGGTGCAGATCCTGATGCCCGAGATGGAGAATCAGGATGGAGTAGCCTTCACAGGGCCCTGCATTTTGGTCATCTTGCTATTGCAAGCATCCTTCTTCAGCATGGTGCCTCAATTACATTGGAGGATTCTAAATCTCGTATACCTGTAGATCTTATATCTGGCAATGTGTTTCAGGTTTTTGGAAATGAACACAGTTCAGTTGCCACTGAGCTATTTAGTTGGGGCAGTGGTGCAAATTATCAGCTTGGTACTGGAAATGCGCATATCCAGAAGCTGCCATGCAAAGTTGATTCACTTAATGGTTCAATCATTAAGCTGATTTCTGCGGCAAAGTTCCATAGTGTGGCCCTTACTGATCGTGGAGAAGTGTATACTTGGGGATTCGGAAGGGGGGGCCGTCTAGGGCATCCTGATTTTGACATACACAGTGGTCAAGCTGCCGTCATCACTCCCCGCCAGGTGATTTCTGGTCTAGGTTCTCGCAGAGTGATGGCAATTGCTGCAGCTAAGCATCATACCGTTGTTGCTACTCAGGGTGGGGAAGTGTTCACTTGGGGATCCAATAGAGAAGGACAGCTTGGGTACACTTCTGTGGATACACAACCCACACCTCGTAGAGTATCTACTTTGAGGTCAAGAATTGTTGCCGTTGCTGCAGCAAACAAGCACACAGCTGTAATTTCTGATTTAGGTGAAGTTTTTACTTGGGGGTGCAATAGAGAGGGTCAGCTTGGTTATGGCACCTCAAACTCGGCATCTAACTACACCCCACATGTGGTTGAATCCTTGAAAGGAAAGATTTTAACTAGAGTTTCTGCAGCAAAATATCACACAATTGTATTAGGATCTGACGGAGAGGTATTTACCTGGGGTCATCGACTTGTTACTCCAAAACGTGTAGTGATTACTAGGAACTTAAAGAAAAGTGGAAGCATTCCTTTAAAATTTCATCGCAAGGAACGACTTCACGTAGTTTCTATAGCTGCTGGAATGGCACACAGCATGGCTCTTACAGAAGATGGTGCACTATTTTATTGGATCTCCTCTGATCCTGATCTTAGATGCCAACAGTTATATGCTATGTGTGGAAGAAATATGGTGAACATATCTGCTGGAAAGTACTGGACTGCTGCAGTTACAGCTACAGGTGATGTTTACATGTGGGACGGGAAGAAAGGTAAGGATAAGCCGTTTGTTGCAACTCGGATGCATGGTGTAAAGAAGGCTACTTCAGTTTCAGTTGGTGAAACACATTTGTTAATTGTGGCTTCCCTCTATCATCCTGTCTACCCTATCAACACGATTGATAATTCTCAGAAACTCAAGTCGAATAACGGAAGTAGTATGGACGAGTTAAGTGAAGACATCTTATTTGAGGATATTGATTCCCATAATTCCTTGGATACAGTTCAAAATGATAATCTTAGTCAAAGGTCTACACCCAGCTTAAAAAGTCTCTGTGAAAAAGTAGCAGCAGAGTCTCTACTGGAGCCACGGAATGCAATACAATTGCTTGAGATTGCTGATTCTCTTGGAGCTGATGATTTGAAGAAATACTGTGAGGACATTGTCATGCGCAACCTTGATTATATATTTTCAGTTTCAACCCATGCTGTATCAAGTGCTTCACTAGATATTTTGGCAAACCTTGAGAGGTTGTTAGACCAGAGATCATCCGAGCCGTGGAGTTACCGTCGGCTCCCAACTCCAACTGCTACACTCCCTGTCATCATTGACAGTGAAGAGGATGATTACGAGATAGAGTGTCAAAGGACTAGTGACAAACCAATGAAAATGTCTGCACTGAAATTGGAGAAAGTTCAAAGGTCAGATTCCTTTCTACAGCCCAAGGATGATCCGGATAGTGAAATGTCGAAAGTAGTTCGAGCTATAAGGAAGAAGTTGCAGCAGATTGAGATGCTTGAAACTAAACAGTCTAAAGGACATCTTCTCGATGACCAGCAGATTGCAAAACTTCAATCCAAGTCAGCACTTGAGAGCTCACTTGCAGAGCTAGGTATTCCGGTAGAGACCCCAAGGAATAAAGAGTCATCTTCTATTCTACCAGAAGGGAAAGGTAGTAAGAAAGGTAAATCATCGAAAAAACAAAGGAGAAAGAGCACCAATAAATCAAACACAGAGCAGACGGAAATAGAGTCTGTTTATTCTAAAAGTGAAGTGGTCCCCGAATCTGAAGACCTATTGGACATTGACATCAAGACTGCTCCTAATTCAAAGGTGGAAGAGGATATCTGCAAACATTCCACGGAAGACCAGGGTGAAAAAGATTTAGGTTTTGTTGTTCAAAAGAAAGATACTTCAGAGTTGGTGAAGGGTACGGGTCAGTCCCCAAAGGTTTCCAAGAAGAAGAACAAGAAGGGTGGGCTTTCTATGTTTCTGAGTGGTGCTCTTGATGAAGTCCCAAAAGAGGTGGCTCCCCCTCCTCCACCGACACCAAAAAATGAAGGTCCTGCTTGGGGTGGGGCCAAGTTTTTGAAGGGTCCTTCTACTCTTCGTGAAATCCAGGATCAACAGAGCAAAATAGTAAAAGGTAACAAGCTAGCTGAGGTTAAAGTCAAGGTGGAAGATCTTTCTGACTTTGGCAGTGGTGGGAAAATAAAGTTGAGTTCATTTCTTCTTTCTAGCCCAATACCTGTTGCGCCAACTAGAAATTCTCAGGCATCTGATGGAGATAAAAATACCCCTCCTTGGGCTGCTTCAGTAACCCCTCCTCAATCCTCCTCTAGGCTGTCTTTAAGGGACATCCAAATGCAACAGGTAAAGAAACAAGGCCTTTCCAGTAGTCCAAAAACTAAAACTTCGGGATTCACTATAGCTACTGGTCAAGGCTCACCATCTGAAGCAACTGGGGTGAACCGCTGGTTCAAACCCGAAGTGGAATCACCATCCTCCATTAGGTCTATTCAAATCGAGGAAAAAGCTATGAAAGATCTCAAACGCTTCTATAGCAGTGTAAAGATTGTCAAAAGACAACCATGTTAA 3255 0.4363 MEVASCPHAQKQNLQKTGRKVCSGSPKDLWLVVREGSLNDVESALSSLKKSGGNINVRNTYGLTPLHVAAWRNHIPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAIASILLQHGASITLEDSKSRIPVDLISGNVFQVFGNEHSSVATELFSWGSGANYQLGTGNAHIQKLPCKVDSLNGSIIKLISAAKFHSVALTDRGEVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVISGLGSRRVMAIAAAKHHTVVATQGGEVFTWGSNREGQLGYTSVDTQPTPRRVSTLRSRIVAVAAANKHTAVISDLGEVFTWGCNREGQLGYGTSNSASNYTPHVVESLKGKILTRVSAAKYHTIVLGSDGEVFTWGHRLVTPKRVVITRNLKKSGSIPLKFHRKERLHVVSIAAGMAHSMALTEDGALFYWISSDPDLRCQQLYAMCGRNMVNISAGKYWTAAVTATGDVYMWDGKKGKDKPFVATRMHGVKKATSVSVGETHLLIVASLYHPVYPINTIDNSQKLKSNNGSSMDELSEDILFEDIDSHNSLDTVQNDNLSQRSTPSLKSLCEKVAAESLLEPRNAIQLLEIADSLGADDLKKYCEDIVMRNLDYIFSVSTHAVSSASLDILANLERLLDQRSSEPWSYRRLPTPTATLPVIIDSEEDDYEIECQRTSDKPMKMSALKLEKVQRSDSFLQPKDDPDSEMSKVVRAIRKKLQQIEMLETKQSKGHLLDDQQIAKLQSKSALESSLAELGIPVETPRNKESSSILPEGKGSKKGKSSKKQRRKSTNKSNTEQTEIESVYSKSEVVPESEDLLDIDIKTAPNSKVEEDICKHSTEDQGEKDLGFVVQKKDTSELVKGTGQSPKVSKKKNKKGGLSMFLSGALDEVPKEVAPPPPPTPKNEGPAWGGAKFLKGPSTLREIQDQQSKIVKGNKLAEVKVKVEDLSDFGSGGKIKLSSFLLSSPIPVAPTRNSQASDGDKNTPPWAASVTPPQSSSRLSLRDIQMQQVKKQGLSSSPKTKTSGFTIATGQGSPSEATGVNRWFKPEVESPSSIRSIQIEEKAMKDLKRFYSSVKIVKRQPC* 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2369 1084 PRINTS Chromosome condensation regulator RCC1 signature 154 170 IPR000408 -
Mtr7g2369 1084 PRINTS Chromosome condensation regulator RCC1 signature 188 201 IPR000408 -
Mtr7g2369 1084 PRINTS Chromosome condensation regulator RCC1 signature 207 223 IPR000408 -
Mtr7g2369 1084 PRINTS Chromosome condensation regulator RCC1 signature 264 280 IPR000408 -
Mtr7g2369 1084 PRINTS Chromosome condensation regulator RCC1 signature 301 317 IPR000408 -
Mtr7g2369 1084 PRINTS Chromosome condensation regulator RCC1 signature 317 331 IPR000408 -
Mtr7g2369 1084 PRINTS Chromosome condensation regulator RCC1 signature 414 432 IPR000408 -
Mtr7g2369 1084 ProSiteProfiles Ankyrin repeat region circular profile. 95 126 - -
Mtr7g2369 1084 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 153 204 IPR000408 -
Mtr7g2369 1084 SMART ANK_2a 61 90 IPR002110 GO:0005515
Mtr7g2369 1084 SMART ANK_2a 95 124 IPR002110 GO:0005515
Mtr7g2369 1084 PRINTS Ankyrin repeat signature 62 77 IPR002110 GO:0005515
Mtr7g2369 1084 PRINTS Ankyrin repeat signature 111 125 IPR002110 GO:0005515
Mtr7g2369 1084 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 264 314 IPR000408 -
Mtr7g2369 1084 ProSiteProfiles Ankyrin repeat profile. 95 127 IPR002110 GO:0005515
Mtr7g2369 1084 Pfam Ankyrin repeats (3 copies) 47 126 IPR002110 GO:0005515
Mtr7g2369 1084 SUPERFAMILY Ankyrin repeat 38 136 IPR036770 -
Mtr7g2369 1084 MobiDBLite consensus disorder prediction 813 829 - -
Mtr7g2369 1084 SUPERFAMILY RCC1/BLIP-II 153 473 IPR009091 -
Mtr7g2369 1084 MobiDBLite consensus disorder prediction 1 22 - -
Mtr7g2369 1084 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 369 424 IPR000408 -
Mtr7g2369 1084 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 315 368 IPR000408 -
Mtr7g2369 1084 PANTHER ANKYRIN REPEAT FAMILY PROTEIN / REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN 1 1082 - -
Mtr7g2369 1084 MobiDBLite consensus disorder prediction 859 916 - -
Mtr7g2369 1084 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 1 1082 - -
Mtr7g2369 1084 Gene3D - 25 120 IPR036770 -
Mtr7g2369 1084 Gene3D - 384 509 IPR009091 -
Mtr7g2369 1084 Gene3D - 121 383 IPR009091 -
Mtr7g2369 1084 MobiDBLite consensus disorder prediction 759 829 - -
Mtr7g2369 1084 MobiDBLite consensus disorder prediction 967 1040 - -
Mtr7g2369 1084 ProSiteProfiles Ankyrin repeat region circular profile. 61 92 - -
Mtr7g2369 1084 CDD BACK 582 617 - -
Mtr7g2369 1084 Pfam Regulator of chromosome condensation (RCC1) repeat 205 259 IPR000408 -
Mtr7g2369 1084 Pfam Regulator of chromosome condensation (RCC1) repeat 315 365 IPR000408 -
Mtr7g2369 1084 Pfam Regulator of chromosome condensation (RCC1) repeat 155 201 IPR000408 -
Mtr7g2369 1084 Pfam Regulator of chromosome condensation (RCC1) repeat 264 311 IPR000408 -
Mtr7g2369 1084 MobiDBLite consensus disorder prediction 967 1042 - -
Mtr7g2369 1084 ProSiteProfiles Ankyrin repeat profile. 61 93 IPR002110 GO:0005515
Mtr7g2369 1084 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 205 263 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2369 Mtr-Chr7 40131181 40140112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2369 32 135 Acyl Lipid Metabolism Gene Families AT5G53470 35.577 6.42e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2369 K24810 - gmx:100800604 1712.58