Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2346 ATGACAATGCAAGCGCATCTTCTAGTGGGACCCATCTCCATCACCACTCATTCTACCGTCGCTGATTCTTCCTATCTCTCCGCCTCGCCTCGTCGCCGGAGACATCTACTCATCTCAGCAGCTTCCTCTTCTTCAGCTTCTGCTATCAACGGCGGCGGCGACCACTATACCGTACTCGGCATAGCGCGTTCTGCGGATGCTGTTGAGATCAAACGTGCTTATCGTCTCCTCGCTCGTAAGTATCATCCTGATGTCAGCAAGGATTTAAATGCTGCTGAATCGTTCAAGAGTATCCGCCATGCTTATGAAGTACTATCCAATGAAACAACAAGAGTTCAGTATGATCGGGAACTTCAATTCAGTCACAAGCCATACCAAGAAAAATGGAGTTACAACACCGAATTTGAAGATGAGGTAAGAAGATATAGGTGGGCTTACATGAGGAGGAAAATGCGCAGTGAAAGATACTGGGAACATTACAATGCCAACAAGGATTACTACAACAGTGAAACATATGAGAAGGAGGATGAAGGAAATTTAGTTGAAAAAATGGGTTCATTTGTTGAAGTTCTTAGATCAACATTCTTGTCACTATTATTATTCCAAACATTAGGATCCCGGCTCTCCCTTACATTTAGTGGTCTGACAGCATTGTTTGATAGGAAATTAGATGCTGGCTATAAAGCTGGTTATGTAATAGCATGGATTATGGGTGGGAGGGCTGGCATAATGCTAGCATTGATCTTGTCATTTGCAAGTTGGGTTTGTGGGAAAACCAGTAGTAGTGTGGTTGCACTATATATGGTAGCCATGTGGGTTGGCTCATCCCTTTCAAGTTATGCACCAATTCCCCAAGGTGCTCTGTTAACTCTCATCTACATGTCCATTAAGCTGCAATCTGACCAAATATAA 912 0.4353 MTMQAHLLVGPISITTHSTVADSSYLSASPRRRRHLLISAASSSSASAINGGGDHYTVLGIARSADAVEIKRAYRLLARKYHPDVSKDLNAAESFKSIRHAYEVLSNETTRVQYDRELQFSHKPYQEKWSYNTEFEDEVRRYRWAYMRRKMRSERYWEHYNANKDYYNSETYEKEDEGNLVEKMGSFVEVLRSTFLSLLLFQTLGSRLSLTFSGLTALFDRKLDAGYKAGYVIAWIMGGRAGIMLALILSFASWVCGKTSSSVVALYMVAMWVGSSLSSYAPIPQGALLTLIYMSIKLQSDQI* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2346 303 Gene3D DnaJ domain 53 187 IPR036869 -
Mtr7g2346 303 SUPERFAMILY Chaperone J-domain 54 124 IPR036869 -
Mtr7g2346 303 CDD DnaJ 54 107 IPR001623 -
Mtr7g2346 303 ProSiteProfiles dnaJ domain profile. 54 118 IPR001623 -
Mtr7g2346 303 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 29 302 - -
Mtr7g2346 303 SMART dnaj_3 53 110 IPR001623 -
Mtr7g2346 303 Pfam DnaJ domain 54 115 IPR001623 -
Mtr7g2346 303 PRINTS DnaJ domain signature 56 74 IPR001623 -
Mtr7g2346 303 PRINTS DnaJ domain signature 74 89 IPR001623 -
Mtr7g2346 303 PRINTS DnaJ domain signature 90 110 IPR001623 -
Mtr7g2346 303 ProSitePatterns Nt-dnaJ domain signature. 95 114 IPR018253 -
Mtr7g2346 303 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 29 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2346 Mtr-Chr7 39945722 39950008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2346 54 119 Miscellaneous Gene Families AT5G49580 43.478 1.06e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2346 - - gmx:100791619 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2277 3 36430155 36434307 Mtr7g2346 7 39945722 39950008 PCT