Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2335 ATGGGTGCGAGTCGAAAGCTTCAAGGAGAAATTGATCGTGTTCTCAAGAAGGTTCAAGAAGGTGTTGAAGTGTTCGACAGTATCTGGAACAAGGTTTATGATACTGACAATGCTAATCAGAAGGAGAAATTTGAAGCTGATCTCAAGAAGGAGATTAAGAAGCTGCAGAGGTATCGAGATCAGATTAAGACTTGGATTCAATCCAGTGAGATCAAGGATAAGAAGGTGAGTGCATCGTATGAGCAGGCTCTTGTAGATGCGCGGAAGCTGATTGAACGGGAAATGGAAAGATTTAAGATATGTGAGAAGGAAACAAAGACCAAAGCATTCTCCAAAGAAGGCTTGGGTCAGCAGCCTAAGACTGATCCGAGAGAGAAGGCTAAATCAGAGACGAGGGATTGGTTAAACAATGTGGTTGGAGAGTTAGAATCTCAGATTGATAACTTTGAAGCTGAGCTTGAAGGCCTTACAGTCAAGAAAGGAAAAAACAGACCTTCTAGATTGACACATCTGGAGACATCAATTACTCGGCACAAGGCTCATATAAAAAAGTGTGAATTGGTTTTGAGGCTTCTTGATAATGACGAATTGAGTCCAGAGGAGGTTAATGATGTGAAAGATTTCTTGGATGACTATGTAGAGCGTAACCAGGATGATTTCGATGAGTTTGATGATGTTGATGAACTGTACAGTTCATTACCTTTAGACAAGGTTGATACTCTAGAAGATCTTGTTACAATTCCCACAAGCGTTGCAGTTGCAAAGACAATCAGTTCATTACCTTTAGACGAGGGGAAGACTCTAGAAGATCTTGTTACAATTCCCACTGGTCTTGCAAAGGTAGCACCTGGTCTTAGCTTGAAAACTCCTTTGGCAGCATCGGCATCGCAGTCAGCGTCATCACAAACATCTGAGCAAGCTGATGAGACAGCGTCTCAGGATAGCAATTCTGACATTGTGGCAAAAACCCCACCTCCTAAAAGTGGTGGAATTAGCTCTTCTACTTCAACACCTACTGGCAACCATGCTACTCCTGCTTCTGTCAACGTTTCAGGTCTTAATTTGTCCAGTGCACCAGCTGCTGCCATCCTTCCTGGTTCAAATTCTGTTCGAAATATCTTGGAGAATGCTATTGTAAATCAGTCTACCTCTCCAAAGGAAGAAGAGATTAACAACTTCCCTACCCGTAGACCATCTCCATCACTTTCTGATGCAGCACTTGTGAGGGGCAGAAACAGCTTGTCAAATCAAGCAACAGCCAGCATCCCTCTTGGTTCTGGAAACACGGTTTCTAGTATTGGAGCCCTTGGTGTAGTTCCTTCAGCCTCAGAAATAACTAAGCGAAATATATTGGGAGCTGATGATAGACTTGGAAGTAGTGGGATGGTGCAACCTCTTGTATCCCCGCTAAGTAATAGATTGATATTGCCTCAGATTGGGAAGGCTAATGATGGAGCTGCCTCTGTTGACTCTAGTATCGTTAATGAAGCTGCAGCTGTATCTGGGAGAGTTTTCTCCCCTTCTGTGGTTCCCGGCATGCAATGGAGACCTGGAAGTCCCTTTCAGAATCAGAATGATGCAGGCCAGCTTCGTGGAAGAACTGAAATAGCTCCTGATCAAAGGGAAAAGTTTTTGCAGAAGTTTCAGCAAGTGCAACAACAAGGGCCTAGTACCCTTCTTAATATGCCTTCCCTTGTTGGAGGAAACCATAAGCAGTTTTCTTCCCAACAACAAAGTCCACTTTTGCAGCAGTTCAACTCTCAAGGTTCGTCTGTTTCTTCACAATCTAGTATGGGACTTGGAGCCCAATCCCCGAGTCTCGGTGGTATTTCTTCTGTCTCGCTGCAGCAGCTCAACTCTGTTCATTCCCCGTCCGGTCAACATCCATTTGCAGGTGTTGCTAAAGATGCAGATAAATTTGAAGAACATCAGCAACATCAGAATTTTCCTGATGAGTCAACAACTGAATCTACTTCTAGCACAGGAATTGGCAAGAATCTCACTGTTGAAGATGATCTGAAATCAGCATATGCACTAGATTCACCTGCTGGTTTATCTGCCTCGCTTCCAGAAGCTGCTCAAACTTTCAGAGATATTGATTTGTCTCCTGGCCAACCTTTACAATCAAATCAATCTACTGGAAACCTCGGCGTCATTGGAAGAAGAAATGGTGTTGAACTTGGAGCCATTGGTGATAGCTTTGGTGCATCAAGTGTTAATTCTGGTGGAGTGCGTGATCAATTATATAATTTACAAATGCTTGAGGCAGCACACTTCAGAATGCCACAACCTAGAGACTCAGAACGTCCTAGAACCTATACTCCTAGGCACCCAGCAATTACACCTTCTAGCTATCCTCAAGTACAAGCGCCTATAGTTAACAATCCTGCCTTTTGGGAGAGATTAGGTCTTGAACCATTTGGCACCGACACCCTGTTCTTTGCATTTTATTATCAACAGAACACATACCAACAATATTTGGCTGCAAAGGAGCTCAAGAAGCAGTCTTGGAGATACCACCGAAAGTATAATACATGGTTTCAGCGGCATGAAGAGCCCAAAGTTGCTACAGATGATTATGAGCAGGGAACATATGTGTACTTCGATTTTCATATTGCAAACGATGACCTGCAACATGGATGGTGTCAAAGAATCAAGAATGACTTCACTTTTGAGTATAATTATCTTGAAGATGAACTTGTATGA 2706 0.4305 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPREKAKSETRDWLNNVVGELESQIDNFEAELEGLTVKKGKNRPSRLTHLETSITRHKAHIKKCELVLRLLDNDELSPEEVNDVKDFLDDYVERNQDDFDEFDDVDELYSSLPLDKVDTLEDLVTIPTSVAVAKTISSLPLDEGKTLEDLVTIPTGLAKVAPGLSLKTPLAASASQSASSQTSEQADETASQDSNSDIVAKTPPPKSGGISSSTSTPTGNHATPASVNVSGLNLSSAPAAAILPGSNSVRNILENAIVNQSTSPKEEEINNFPTRRPSPSLSDAALVRGRNSLSNQATASIPLGSGNTVSSIGALGVVPSASEITKRNILGADDRLGSSGMVQPLVSPLSNRLILPQIGKANDGAASVDSSIVNEAAAVSGRVFSPSVVPGMQWRPGSPFQNQNDAGQLRGRTEIAPDQREKFLQKFQQVQQQGPSTLLNMPSLVGGNHKQFSSQQQSPLLQQFNSQGSSVSSQSSMGLGAQSPSLGGISSVSLQQLNSVHSPSGQHPFAGVAKDADKFEEHQQHQNFPDESTTESTSSTGIGKNLTVEDDLKSAYALDSPAGLSASLPEAAQTFRDIDLSPGQPLQSNQSTGNLGVIGRRNGVELGAIGDSFGASSVNSGGVRDQLYNLQMLEAAHFRMPQPRDSERPRTYTPRHPAITPSSYPQVQAPIVNNPAFWERLGLEPFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDDYEQGTYVYFDFHIANDDLQHGWCQRIKNDFTFEYNYLEDELV* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2335 901 Coils Coil 41 61 - -
Mtr7g2335 901 MobiDBLite consensus disorder prediction 558 605 - -
Mtr7g2335 901 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Mtr7g2335 901 MobiDBLite consensus disorder prediction 296 345 - -
Mtr7g2335 901 PANTHER BNAA10G16600D PROTEIN 1 245 - -
Mtr7g2335 901 PANTHER BNAA10G16600D PROTEIN 254 900 - -
Mtr7g2335 901 MobiDBLite consensus disorder prediction 650 665 - -
Mtr7g2335 901 MobiDBLite consensus disorder prediction 382 401 - -
Mtr7g2335 901 Pfam NOT2 / NOT3 / NOT5 family 758 896 IPR007282 GO:0006355
Mtr7g2335 901 MobiDBLite consensus disorder prediction 641 665 - -
Mtr7g2335 901 PIRSF NOT_su_3_5 1 901 IPR012270 GO:0006355|GO:0030015
Mtr7g2335 901 MobiDBLite consensus disorder prediction 110 131 - -
Mtr7g2335 901 MobiDBLite consensus disorder prediction 382 399 - -
Mtr7g2335 901 PANTHER CCR4 NOT-RELATED 1 245 IPR040168 GO:0030015
Mtr7g2335 901 PANTHER CCR4 NOT-RELATED 254 900 IPR040168 GO:0030015
Mtr7g2335 901 Coils Coil 132 159 - -
Mtr7g2335 901 Gene3D - 742 897 IPR038635 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2335 K12580 - gmx:100783415 1392.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2335 7 39805159 39818143 Mtr7g2335 7 39805159 39818143 ECH