Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2325 ATGATCAGAATCAGATCTAACTTATCTGTTTTTTCTATTGCTCTATTACGCATAAGGCATAACGCAATCACTGTTAATCACTGTGATATAGTTCACAAGCCTCTTATGAATGCTTCTTTCAATGCTTTTAATTCTTCAAATTATTACACTTTTTTCGCTCCACCGAAATTTAGTTTTTCAGTTAGGTTCTTTTCTGCTGAATCCTCAAGTGACGATGACTATAATGAAGATGACGGTGATGATGATCATGATAAGAATAGTAGTCAGTTACATTTAAGGGATGATGGTTTTGTCAAAGATGTTAAGACCATTTTGGATATAATTCACAAACCGGGTTCTGGGCCCTATGAAATTAAGCAGAAGCTTGAGGATTGTAATGTTAAAGCATCATCGGAGTTGGTTGTGGAGGTTCTTTCGAGGGTTCGCAATGACTGGGAAGCAGCTTTCACTTTTTTCTTGTGGGCTGGAAAGCAACCGGGGTATGATCATTCGGTTCGCGAATATCATTCAATGATATCTGTTCTTGGTAAAATGAGGAGGTTTGATACTGCTTGGGCCTTAGTTGAAGAAATGAGAAGAGGAAAAACTGGTGAATCTATTGTTACCCCACAAACTCTTTTGATTATGATAAGGAAATACTGCGCTGTTCATGATGTTGGTAGGGCTATAAACACTTTCTACGCTTTTAAGCGGTTTAATTTTCAAGTTGGATTGTACGAGTTTCAAGGCCTTCTTTCTGCGCTTTGTCGGTACAAGAATGTGCAGGATGCTGAGCATTTACTGTTCTGTAATAAGAATGTTTTCCCACTTGACACCAAAAGCTTTAACATCATTCTTAATGGATGGTGCAATTTGATTGTTAGCGCGCGTAATGCAGAGAGGATCTGGGAGGAGATGAGTAAGAGACGAATCCAACACGATGTTGTCTCGTATGCAAGTATCATATCTTGCTATTCAAAGTCTTCTAAACTTTATAGGGTGCTCCAGCTGTTTGAACAAATGAAGAAAAGGAATATCACTCCTGATAGGAAGGTTTATAATGCAGTCATTTTTTCTCTTGCGAAGAATAGGATGGTGAAAGAAGCTGTAAATCTTATTATAAAAATGGAAGATAACAATGTTACTCCGGATGCTATTACTTACAACTCCCTGATCAAACCTCTCTGCAAAGCCCGCAAAATTGATGAAGCAAAAGAAATTTTCAATGTGATGTTGGAGCGAGGCATATCCCCGTCCATTCGGACTTTTCATGCTTTCTTCCGAATATTAAGAGTCAAGGAAGAAGTATTTGAGCTTTTGGACAAAATGAAAGAGCTAGGGTGCAACCCAACTATCGAGACATATATAATGTTGATAAGAAAGTTTTGCCGGTGGCGCCAGCTTGATGAAGTCAAAAGGATATGGAATGCAATGAGGGAAGATGGAATTGGCCATGATCGTAGCTCGTATATTGTACTGATTCATGGTCTGTTTCTGAATTGTAAGGTGGAGGAAGCATACAAATATTATATAGAGATGCAAGAGAAAGGTTTTCTCCCTGAACCAAAGACAGAAAGTATGCTTCAGGCATGGCTTTCTGGGAGACAAGTAACAGACAGCCAGGCAACAGATCTAGAACACAATCAATTGGAACATGGTGGTCTTAAAAAGAGTGTCAAACCTATACAAAGTAAATTTGATAGGGAAAAGGATTTTCTTCGCGAACCCGAGACCAGAAGTGTATCAAGAGAAGGAGGCTTTTCTTTCTGGGAGAAGTAA 1758 0.3879 MIRIRSNLSVFSIALLRIRHNAITVNHCDIVHKPLMNASFNAFNSSNYYTFFAPPKFSFSVRFFSAESSSDDDYNEDDGDDDHDKNSSQLHLRDDGFVKDVKTILDIIHKPGSGPYEIKQKLEDCNVKASSELVVEVLSRVRNDWEAAFTFFLWAGKQPGYDHSVREYHSMISVLGKMRRFDTAWALVEEMRRGKTGESIVTPQTLLIMIRKYCAVHDVGRAINTFYAFKRFNFQVGLYEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLDTKSFNIILNGWCNLIVSARNAERIWEEMSKRRIQHDVVSYASIISCYSKSSKLYRVLQLFEQMKKRNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFNVMLERGISPSIRTFHAFFRILRVKEEVFELLDKMKELGCNPTIETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSSYIVLIHGLFLNCKVEEAYKYYIEMQEKGFLPEPKTESMLQAWLSGRQVTDSQATDLEHNQLEHGGLKKSVKPIQSKFDREKDFLREPETRSVSREGGFSFWEK* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2325 585 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 307 341 IPR002885 -
Mtr7g2325 585 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 444 478 IPR002885 -
Mtr7g2325 585 Pfam PPR repeat 447 476 IPR002885 -
Mtr7g2325 585 Pfam PPR repeat 168 193 IPR002885 -
Mtr7g2325 585 Pfam PPR repeat 309 339 IPR002885 -
Mtr7g2325 585 Pfam PPR repeat 482 511 IPR002885 -
Mtr7g2325 585 Gene3D Tetratricopeptide repeat domain 428 543 IPR011990 GO:0005515
Mtr7g2325 585 Gene3D Tetratricopeptide repeat domain 118 262 IPR011990 GO:0005515
Mtr7g2325 585 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 377 411 IPR002885 -
Mtr7g2325 585 TIGRFAM PPR: pentatricopeptide repeat domain 309 342 IPR002885 -
Mtr7g2325 585 TIGRFAM PPR: pentatricopeptide repeat domain 168 193 IPR002885 -
Mtr7g2325 585 TIGRFAM PPR: pentatricopeptide repeat domain 482 513 IPR002885 -
Mtr7g2325 585 TIGRFAM PPR: pentatricopeptide repeat domain 345 378 IPR002885 -
Mtr7g2325 585 TIGRFAM PPR: pentatricopeptide repeat domain 447 476 IPR002885 -
Mtr7g2325 585 TIGRFAM PPR: pentatricopeptide repeat domain 379 412 IPR002885 -
Mtr7g2325 585 PANTHER OS01G0816000 PROTEIN 65 575 - -
Mtr7g2325 585 MobiDBLite consensus disorder prediction 566 585 - -
Mtr7g2325 585 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 342 376 IPR002885 -
Mtr7g2325 585 Pfam PPR repeat family 341 390 IPR002885 -
Mtr7g2325 585 Gene3D Tetratricopeptide repeat domain 263 427 IPR011990 GO:0005515
Mtr7g2325 585 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 479 513 IPR002885 -
Mtr7g2325 585 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 65 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2325 Mtr-Chr7 39667093 39669600 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2325 61 554 Glycosyltransferase AT1G05670 21.400 1.76e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2325 - - gmx:100812155 872.463