Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2312 ATGACCAATTACTTATCAGAAAGCTATGTCAAATTTCTTCATCATATGAATAATATGATGAATCTTTACTTCAAGATTGGGGGGGATGTTGATGATGGGTGGAAGGTGTTTGATAAAATGCGTGTGAGGAATGTGGTTTCGTGGACAACTGTGATTGCTGGGCTTGTAGCTTGTGGGAAATTGGATACTGCGAGGGAAGTATTTGAGAGGATTCCGTCGAAGAATGTTGTGTCGTGGACGGCGATGATAAATGGGTATGTGAAAAATGATAACCCGATTAAGGCTTTTGATTTGTTTGAAAGGATGTTGATTGATAATGTGAGGCCGAATGAGTTTACACTGGTGAGCTTGATTAAAGCTTGTACTGATTTGGGTAGTCTGAAATTGGGCAGACGAATGCATGATTTCGCATTGAAGAATGGTTTTGAGCTTGGACCTTTTTTGGGTACTGCTCTTGTTGATATGTATAGCAAATGTGGTAGTCTAGATGCTGCTGTTAAAGTGTTTGGTTTAATGGAAGTGAGAAACTTGGCTACCTGGAATACAATGCTTACTAGCTTCGGTGTGCATGGGTTTGGGAATGAAGTGCTAGACCTTTTCAAAGAAATGGAGAAGGCCGGTGTAGTTCCTGATGCTATCACTTTTGTTGGTGTTTTGAGTGCTTGTGTTCAAATTAATGATCTGGAACTAGGCCAGAAGTATTTCAGTCTCATGACAGAACATTACAGTTTAACACCTATCTTGGAACACTATACGTGCATGGTTGGACTCTATACTCGTGCTAATGAGTTAAATGAGATTCGCACATTAGGGGATACAATGTCATTGTCAATAGAAGCAAATCATAATGTTGCAGAATTGCTACAAGAGAGTAAACCCACTGGTTTTGATGACATGGAGAAACTCATACACAAGCATTACAGGGATTCAGATTTATCAGAATTCGTTTTAGATCATTCTGCAACTCCAACCCAACCAAATTCCAACCCTTGGATTCAAATTGTATCATGA 1011 0.3947 MTNYLSESYVKFLHHMNNMMNLYFKIGGDVDDGWKVFDKMRVRNVVSWTTVIAGLVACGKLDTAREVFERIPSKNVVSWTAMINGYVKNDNPIKAFDLFERMLIDNVRPNEFTLVSLIKACTDLGSLKLGRRMHDFALKNGFELGPFLGTALVDMYSKCGSLDAAVKVFGLMEVRNLATWNTMLTSFGVHGFGNEVLDLFKEMEKAGVVPDAITFVGVLSACVQINDLELGQKYFSLMTEHYSLTPILEHYTCMVGLYTRANELNEIRTLGDTMSLSIEANHNVAELLQESKPTGFDDMEKLIHKHYRDSDLSEFVLDHSATPTQPNSNPWIQIVS* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2312 336 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 75 109 IPR002885 -
Mtr7g2312 336 PANTHER BNAA06G32750D PROTEIN 13 283 - -
Mtr7g2312 336 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 13 283 - -
Mtr7g2312 336 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 176 210 IPR002885 -
Mtr7g2312 336 Pfam PPR repeat family 74 121 IPR002885 -
Mtr7g2312 336 Pfam PPR repeat family 176 223 IPR002885 -
Mtr7g2312 336 Gene3D Tetratricopeptide repeat domain 150 308 IPR011990 GO:0005515
Mtr7g2312 336 Gene3D Tetratricopeptide repeat domain 12 146 IPR011990 GO:0005515
Mtr7g2312 336 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 44 74 IPR002885 -
Mtr7g2312 336 TIGRFAM PPR: pentatricopeptide repeat domain 46 76 IPR002885 -
Mtr7g2312 336 TIGRFAM PPR: pentatricopeptide repeat domain 179 212 IPR002885 -
Mtr7g2312 336 TIGRFAM PPR: pentatricopeptide repeat domain 77 111 IPR002885 -
Mtr7g2312 336 TIGRFAM PPR: pentatricopeptide repeat domain 150 176 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2312 Mtr-Chr7 39506492 39508199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2312 24 274 Glycoside Hydrolase AT3G49170 34.109 5.29e-46 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2312 - - gmx:100789790 457.218