Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2311 ATGGGCACAAGCAGCGACCCAACCCAAGACACTTCCGACGAGCAACAAAAACGTTCCGAAATCTACACTTACGAAGCACCATGGCACATCTACGCTATGAACTGGAGCGTCCGTCGCGACAAAAAATATCGCCTCGCTATCGCTTCTCTCTTAGAACAATACCCTAACCGCGTCGAAATCGTTCAACTTGATGACACCACTGGCGAAATCAAATCCGACCCAAATCTCTCCTTCGAACATCCTTACCCACCCACCAAATCCATCTTCATCCCTGACAAAGACTGCCAACGCCCCGACCTCCTCGCCACCTCCTCCGATTTCCTCCGTATTTGGCGGATCTCCGATTCCGACGAATCAGCTTCCGACTCTCGTGCCGTCGAACTCAAAACTCTTCTCAATGGTAACAAAAACAGTGAATACTGTGGCCCAATTACTTCTTTTGATTGGAATGAAGCTGAACCTCGTCGAATTGGTACTTCCAGTATTGATACAACGTGTACTATTTGGGATATTGAGAAAGAAACCGTTGATACGCAGTTAATTGCCCATGATAAAGAGGTTTATGATATAGCTTGGGGTGGTGTTGGTGTTTTTGCATCGGTTTCTGCTGATGGGTCTGTTAGGGTTTTTGATTTACGTGATAAAGAACATTCTACTATAATTTACGAAAGTTCTGAACCTGATACTCCGTTGGTTAGGCTAGGTTGGAATAAACAAGATCCTAGGTATATGGCAACGATTATAATGGATTCTGCTAAGGTTGTTGTGCTGGATATTCGTTTTCCGACGCTACCGGTGGTGGAGTTGCAGAGGCATCAAGCTAGTGTGAATGCCATAGCGTGGGCGCCACATAGTTCTTGTCATATTTGCACTGCTGGTGATGATTCTCAGGCGTTGATTTGGGATCTTTCTTCAATGGGGCAGCCTGTTGAAGGTGGGCTTGATCCTATTTTGGCTTATACTGCTGGTGCTGAGATTGAACAGCTTCAATGGTCTTCTTCTCAGCCTGATTGGGTCGCTATTGCTTTTTCGACTAAGCTTCAGATTCTTAGGGTTTGA 1059 0.457 MGTSSDPTQDTSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDTTGEIKSDPNLSFEHPYPPTKSIFIPDKDCQRPDLLATSSDFLRIWRISDSDESASDSRAVELKTLLNGNKNSEYCGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEKETVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2311 352 PANTHER WD REPEAT CONTAINING PROTEIN 12 352 IPR045159 -
Mtr7g2311 352 Pfam WD domain, G-beta repeat 180 211 IPR001680 GO:0005515
Mtr7g2311 352 Pfam WD domain, G-beta repeat 269 302 IPR001680 GO:0005515
Mtr7g2311 352 SUPERFAMILY WD40 repeat-like 56 310 IPR036322 GO:0005515
Mtr7g2311 352 Gene3D - 6 351 IPR015943 GO:0005515
Mtr7g2311 352 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 269 305 - -
Mtr7g2311 352 SMART WD40_4 262 302 IPR001680 GO:0005515
Mtr7g2311 352 SMART WD40_4 125 170 IPR001680 GO:0005515
Mtr7g2311 352 SMART WD40_4 173 211 IPR001680 GO:0005515
Mtr7g2311 352 ProSiteProfiles Trp-Asp (WD) repeats profile. 269 305 IPR001680 GO:0005515
Mtr7g2311 352 ProSitePatterns Trp-Asp (WD) repeats signature. 289 303 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2311 Mtr-Chr7 39501079 39502497 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2311 K11805 - csv:101203334 673.7