Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2309 ATGAGTTCTTCATTTTGGTCTTTATGTTTGATCTTAGCATCACTAGTTTCTTCTTCACTCTGTGCTCCTCCAAGGAAGCCAGTTGATGTACCATTTGGAAGAAACTATTACCCCACTTGGGCTTTTGATCATATCAAATACTTCAATGGTGGTTCTGAGATTCAACTTCATCTTGACAAGTACACTGGTACTGGTTTTCAGTCCAAAGGTTCATACTTGTTTGGTCATTTCAGTATGAACATTAAGATGGTTCCTGGTGATTCAGCTGGCACAGTCACTGCTTTCTATCTATCTTCACAAAATGCTGAACATGATGAAATAGATTTTGAGTTCTTGGGGAACAGAACAGGACAACCTTACATTTTACAAACAAATGTGTTCACTGGTGGACAAGGTAACAAAGAACAAAGGATCTTTCTTTGGTTTGATCCTACAAAGGAGTTTCACAGATACTCTATTCTATGGAACATGTACCAGATTGTGTTTTTTGTAGATGATGTACCAATCAGGGTGTTCAAGAACAGCAAGGACTTAGGAGTGAAATTTCCATTTGACCAACCAATGAAAATTTACAACAGTTTATGGAATGCAGATGATTGGGCCACAAGGGGTGGATTAGAAAAAACTGATTGGTCAAAAGCACCATTCATAGCAGGTTACAAAAGTTTCCACATTGATGGTTGTGAATCATCTGTTAATGCAAAGTTTTGTGCAACACAAGGTAAAAGATGGTGGGATCAACCTGAATTTCGTGATCTTGATGCTGCTCAATGGCGTAGACTAAGATGGGTGCGCCAAAAATACACCATTTATAACTATTGCACCGATAGGAAACGTTTGCCTCAAATTCCACCTGAATGCAAAAGAGACCGTGACATATAA 882 0.3855 MSSSFWSLCLILASLVSSSLCAPPRKPVDVPFGRNYYPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMNIKMVPGDSAGTVTAFYLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGQGNKEQRIFLWFDPTKEFHRYSILWNMYQIVFFVDDVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAGYKSFHIDGCESSVNAKFCATQGKRWWDQPEFRDLDAAQWRRLRWVRQKYTIYNYCTDRKRLPQIPPECKRDRDI* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2309 293 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 291 IPR013320 -
Mtr7g2309 293 CDD GH16_XET 27 287 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mtr7g2309 293 Pfam Glycosyl hydrolases family 16 33 213 IPR000757 GO:0004553|GO:0005975
Mtr7g2309 293 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 240 287 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Mtr7g2309 293 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 23 220 IPR000757 GO:0004553|GO:0005975
Mtr7g2309 293 PIRSF EndGlu_transf 1 292 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mtr7g2309 293 Gene3D - 18 293 - -
Mtr7g2309 293 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 2 291 - -
Mtr7g2309 293 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 2 291 IPR044791 GO:0004553
Mtr7g2309 293 ProSitePatterns Glycosyl hydrolases family 16 active sites. 106 116 IPR008263 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2309 Mtr-Chr7 39480567 39482407 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g2309 7 293 Glycoside Hydrolase AT5G13870 80.139 0.0 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2309 K08235 - gmx:547775 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2309 7 39480567 39482407 Mtr7g2309 7 39480567 39482407 ECH