Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2297 ATGACTTCTCTTCTCCCATCTCCACAACTCATTTCCACACACCCCTTCACCAAACTCACCTCCCCCCTAAAACCACGTCACCTCTTCTTCCTCAACCACCCTTTTCACCACAAAACCATTAAAAAACTACTTTTTACACCACCCTTTTACCCCCTCAATGCAGTCCACACACAAGGACTCTATGCCCCTTCTTCACCCTCCAAAACTGACAAACTTGACCCTGAAAATGACCCTATCTCAACCCTTAACCAACGCATTCGTCAGGAATATGGCAAAAGAAAGGTTTCTAGGAATGTAATGGACTCTGAAGAAGCTGATAAGTATATACAAATGGTCAAGGAACAACAGCAAAGGGGGTTGCAGAAGCTTAAGGGTGATAGAGAGGGTAAAGATGGTACCTTTAGTTATAAGGTAGACCCTTACACACTTCGTTCTGGGGACTATGTTGTGCATAAGAAAGTTGGTATTGGGAGATTTGTTGGGATTAAATTCGATGTTTCGAAGAATTCGATAGAACCTACTGAGTATGTTTTTATTGAGTATGCTGATGGAATGGCTAAGCTTCCTGTTAAACAGGCTTCTAAAATGCTCTATAGATATAGTCTTCCAAATGAAAACAAAAAGCCTAGGGCATTGAGCAAGTTGAATGATACCAGTGCATGGGAGAAAAGAAAGACTAAAGGGAAGGTTGCCATACAGAAGATGGTTGTTGACTTGATGGAGCTCTATCTGCATAGGCTTAAACAAAGAAGGCCTCCCTATCCTATGAGCCCTGTCGTGGCTGAATTCGCAGCTAAATTTCCTTATGAACCTACGCCGGATCAGAAACAGGCTTTTATTGATGTTGAGAAGGATTTGACGGAGCGAGAAACTCCAATGGACAGGTTAATTTGTGGAGATGTTGGTTTTGGTAAAACTGAGGTTGCGATGCGTGCCATCCACTGTGTTGTCGCAGCTAAAAAGCAAGCAATGGTTCTTGCACCGACAATAGTTCTAGCAAAACAACATTTTGATGTTATTTCAGAGCGCTTTTCTGTATATCCTGATATTAAAGTTGGACTGCTAAGCAGGTTTCAGACCAGATCAGAGAAGGAAGCATACTTGGAAATGATTAAGAATGGTGACTTGGATATTATTGTTGGAACTCACTCGCTCTTAGGAAACCGCGTTGTTTATAACAATCTTGGCCTGCTTGTTGTTGATGAGGAGCAGAGGTTTGGTGTCAAACAGAAGGAGAGGATTGCTTCTTTTAAAACTTCTGTGGACGTACTTACTTTATCTGCAACGCCTATACCACGGACTCTTTATTTAGCATTGACAGGATTTCGTGATGCTAGTTTAATTTCAACTCCACCTCCAGAAAGAGTTCCTATCAAGACTCAGCTTTCATCATTCAGTAAGGACAAAGTAATTTCAGCCATCAAGTATGAGCTGGATCGTAGTGGCCAAGTTTTTTATGTTCTGCCACGTATTAAAGGACTGGAAGAAGCAATGGAATTTCTTGAAGAGGCATTCCCCGATGTGGAAATAGCCGTTGCCCATGGGAAGCAATTCTCAAAACAATTAGAGGATACCATGGAGAAGTTTACTCTAGGTGAAATAAAAATCCTTATCAGTACAAATATAGTTGAAAGTGGGCTTGACATTCAAAATGCAAACACCATCATCATTCAGGATGTTCAACAATTTGGCCTTGCACAGTTGTACCAGTTGCGAGGAAGGGTTGGGCGGGCAGACAAGGAAGCTTATGCATACTTATTTTATCCTGACAAGAGTCTGCTAACTGATCAAGCATTGGAAAGGCTTGCAGCTCTTGAAGAATGTCGTGAACTTGGTCAAGGCTTCCAACTAGCTGAGAGAGACATGGGTATAAGAGGTTTTGGTACTATTTTCGGCGAGCAACAAACAGGAGATGTTGGAAACGTTGGCATTGATCTTTTCTTTGAGATGCTCTTTGAGAGTTTATCCAAGGTTGAAGATCACCGTGTTGTTTCAGTTCCTTATCACTCGGTGCAGGTTGACTTAAACATCAATCCTCACCTCTCTTCTGAATACATAAATCATCTCGAGAACCCTATGGAAATAATAAATGAAGCTGAGCGAGTTGCTGGGGAAGACATCTGGAGTTTAATGCAATTTACAGAGAACTTCCGCCGCCAATATGGCAAAGAACCTCGCCCAATGGAGCTTATCTTAAAGAAGCTTTACTTGAGGAGAATGGCGGCTGATATAGGGGTAACCAGAATTTACTCTTCAGGGAAGACGGTGTTTATGAAAACAAACATGAATAAAAAGGTTTTCAAGATGATGACAGAGTCGATGACATCGGATATATATAAAGATTCATTGGTTCTTGAGGGTGACCAAATTAAGGCTGAACTTCTATTAGAGCTACCAAAAGAACAGCTTCTTAATTGGATATTTAACTGCATGGCTGAACTTCATGCTTCACTAGCAGCCCTCATAAAGTACTAG 2475 0.4141 MTSLLPSPQLISTHPFTKLTSPLKPRHLFFLNHPFHHKTIKKLLFTPPFYPLNAVHTQGLYAPSSPSKTDKLDPENDPISTLNQRIRQEYGKRKVSRNVMDSEEADKYIQMVKEQQQRGLQKLKGDREGKDGTFSYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVSKNSIEPTEYVFIEYADGMAKLPVKQASKMLYRYSLPNENKKPRALSKLNDTSAWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPMSPVVAEFAAKFPYEPTPDQKQAFIDVEKDLTERETPMDRLICGDVGFGKTEVAMRAIHCVVAAKKQAMVLAPTIVLAKQHFDVISERFSVYPDIKVGLLSRFQTRSEKEAYLEMIKNGDLDIIVGTHSLLGNRVVYNNLGLLVVDEEQRFGVKQKERIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIKTQLSSFSKDKVISAIKYELDRSGQVFYVLPRIKGLEEAMEFLEEAFPDVEIAVAHGKQFSKQLEDTMEKFTLGEIKILISTNIVESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLTDQALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFESLSKVEDHRVVSVPYHSVQVDLNINPHLSSEYINHLENPMEIINEAERVAGEDIWSLMQFTENFRRQYGKEPRPMELILKKLYLRRMAADIGVTRIYSSGKTVFMKTNMNKKVFKMMTESMTSDIYKDSLVLEGDQIKAELLLELPKEQLLNWIFNCMAELHASLAALIKY* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2297 824 Gene3D - 143 657 IPR027417 -
Mtr7g2297 824 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 16 795 - -
Mtr7g2297 824 SUPERFAMILY CarD-like 137 206 IPR036101 -
Mtr7g2297 824 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 466 623 IPR001650 -
Mtr7g2297 824 SMART CarD_TRCF_2 142 244 IPR003711 -
Mtr7g2297 824 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 286 448 IPR014001 -
Mtr7g2297 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 320 594 IPR027417 -
Mtr7g2297 824 CDD DEXHc_TRCF 257 450 - -
Mtr7g2297 824 Pfam DEAD/DEAH box helicase 293 431 IPR011545 GO:0003676|GO:0005524
Mtr7g2297 824 Pfam CarD-like/TRCF domain 143 243 IPR003711 -
Mtr7g2297 824 Pfam Helicase conserved C-terminal domain 473 578 IPR001650 -
Mtr7g2297 824 SMART ultradead3 267 459 IPR014001 -
Mtr7g2297 824 Gene3D - 146 206 - -
Mtr7g2297 824 SUPERFAMILY TRCF domain-like 667 814 IPR037235 -
Mtr7g2297 824 Gene3D - 207 450 IPR027417 -
Mtr7g2297 824 SMART helicmild6 495 579 IPR001650 -
Mtr7g2297 824 PANTHER TRANSCRIPTION-REPAIR-COUPLING FACTOR 16 795 - -
Mtr7g2297 824 Gene3D - 670 818 IPR037235 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2297 Mtr-Chr7 39384382 39398404 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2297 - - gmx:100791900 1304.27