Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2295 ATGGGGTGTGAATCACCACTACAAATCAACAAATCAATTCAGTTTCATCCAACCACCCCTGAAAAATCCACTCCTTACCCTCCAAATCCAAGCCTTGTTCAACGTATGCTAAATGATACATGCTTCAAATGTAAACAACAAGGTCACTGGTCCATGTATTGTCCTAACAACAACAATAACCATTCACCGGTTTTGTCTTCCAACAAGCAAATACACTGTCGTTGCGGTCACGGTTTTTGTGATGTTAAAATCTCTAATAGTGAAAGAAACAAAGGGAGGTTGTACTTTGCTTGTCCTATCAAAAGGGGTGCACCTTGTGGTACCTTTGTGAAGTGGTGCGATGATGAAAGGGATTTGGAGCCTTCTTTGGTTAAGTATCCTAAGTGTAAATGTGGTGCTGGTGTCTGTAAAAGAGAGATGGAAGGTGCTAAGTACTATTTTACTTGCCCCGTTAAACAGAATTTTGGATCTTGTGGTTACCGTGCGTTGGAAGTTGAACTACTCAATAATGCAAGCACCGATGAACTGGTCAATAGCACAAGCATTGGCGACAACCTGACTAATGGCTTTGCTGAGGGAAGTGATTTGCTATTAACGACCAAAATGACGAGAATAACGGACAATTATGAAAATCCTTCAACTGTGGCTGTATCTGAGATTCCAGAGGGAAGAAGTGGAGGATCACCAATATACGAAGCCAATTCACAACCTGTCGGTTTTCCAGAAATTGAGTTTAAGGATGATCAACAATTGATAAACCTAGCCTCGTGGGAGGCAATTGAGGACAAAGTTTCCCCATCATCTCGTTTTTCAACACCCTCAAGGATCAGTTGTCGACAAAGCTTATTTCCGAGGGACATTTTTTCTGCTGATGCAACATTTGATGCTCCGAAACAAACAAGTACTCTTAATAGTCAAAGTGAATGCAACGACCTTACTATCAAGACTCCTAATCAACGTACCCAGCTTTCCACAGATGTAGTAAGCCCCAATAGATCACCTGGAAGTGAAAAGCTAAAGGAACAAAAGCAAAGAGAAGCGGTGATATTTACACAGCAGGGACTTCTCAATGATCTAGAGGGTTTGGATTTTCACCAGCATGAGTCTATGAGAGACACAACAGAAGCAGCCTTTTCAGTGTTAAATTGTTTAAAATTTGTTTATAAACAATTTTCTGACTATGTATGGGAGTTCATCAATCTTGCAAAGTCTACGGCAGAAATCGACAAGTCCATGGAAAATTCGCCTACTCTGGAGGAGCACATTAAATTCTTAGAGGAGGAGAAAGTGAGATTGGCTAACATCCGGGATGACTGTGTGAAGATTGAGACTTCGCTCGCAGTATTTGATGAGAAAAGAAATTTGCTTAGTGAAGAAGTCGCTAATCTCCAGGCCGCGCTCCTTGAAAAACGAAAAGAGTTGAAATTTTGTGAACTGGAGAAGATGAAGGCAGAGGCTCGGCTTGACGATATGAAAAGAAGGATCTCGGAGGTCATCCTTAAAAGATAA 1509 0.4122 MGCESPLQINKSIQFHPTTPEKSTPYPPNPSLVQRMLNDTCFKCKQQGHWSMYCPNNNNNHSPVLSSNKQIHCRCGHGFCDVKISNSERNKGRLYFACPIKRGAPCGTFVKWCDDERDLEPSLVKYPKCKCGAGVCKREMEGAKYYFTCPVKQNFGSCGYRALEVELLNNASTDELVNSTSIGDNLTNGFAEGSDLLLTTKMTRITDNYENPSTVAVSEIPEGRSGGSPIYEANSQPVGFPEIEFKDDQQLINLASWEAIEDKVSPSSRFSTPSRISCRQSLFPRDIFSADATFDAPKQTSTLNSQSECNDLTIKTPNQRTQLSTDVVSPNRSPGSEKLKEQKQREAVIFTQQGLLNDLEGLDFHQHESMRDTTEAAFSVLNCLKFVYKQFSDYVWEFINLAKSTAEIDKSMENSPTLEEHIKFLEEEKVRLANIRDDCVKIETSLAVFDEKRNLLSEEVANLQAALLEKRKELKFCELEKMKAEARLDDMKRRISEVILKR* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2295 502 Coils Coil 446 501 - -
Mtr7g2295 502 ProSiteProfiles Zinc finger CCHC-type profile. 41 56 IPR001878 GO:0003676|GO:0008270
Mtr7g2295 502 MobiDBLite consensus disorder prediction 321 342 - -
Mtr7g2295 502 Pfam GRF zinc finger 72 115 IPR010666 GO:0008270
Mtr7g2295 502 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 13 497 - -
Mtr7g2295 502 PANTHER OS07G0190500 PROTEIN 13 497 - -
Mtr7g2295 502 SUPERFAMILY Retrovirus zinc finger-like domains 35 62 IPR036875 GO:0003676|GO:0008270
Mtr7g2295 502 SMART c2hcfinal6 40 56 IPR001878 GO:0003676|GO:0008270
Mtr7g2295 502 Gene3D - 22 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2295 Mtr-Chr7 39363652 39367407 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2295 - - cam:101489051 476.478